“马赛放线杆菌”，一种引起慢性尿路感染的新菌种。
"Actinobaculum massiliae," a new species causing chronic urinary tract infection.
作者信息
Greub Gilbert, Raoult Didier
机构信息
Unité des Rickettsies, Faculté de Médecine, Université de la Méditerranée, Marseille, France.
出版信息
J Clin Microbiol. 2002 Nov;40(11):3938-41. doi: 10.1128/JCM.40.11.3938-3941.2002.
Abstract
We report on a new Actinobaculum species, "Actinobaculum massiliae," isolated from the urine of an elderly woman with recurrent cystitis. Its phenotypic pattern was similar to those of both of the other Actinobaculum species described to date. On 16S rRNA sequencing, the Marseille isolate shared 95% homology with Actinobaculum suis, 92 to 93% homology with Actinobaculum schaalii, 91 to 92% homology with Arcanobacterium spp., and 87 to 90% homology with Actinomyces species. A bootstrap value of 99% supports the node separating the Actinobaculum sp. from its closest neighbor (A. suis). In conclusion, on the basis of phenotypic, genotypic, and phylogenetic assessments, we show that the Marseille isolate is a previously unrecognized organism within the Actinobaculum genus, and we propose placement of the organism in the taxon "Actinobaculum massiliae."
摘要
我们报告了一种新的放线杆菌属物种，“马赛放线杆菌”，它是从一名患有复发性膀胱炎的老年女性尿液中分离出来的。其表型模式与迄今描述的其他两种放线杆菌属物种相似。在16S rRNA测序中，来自马赛的分离株与猪放线杆菌有95%的同源性，与沙氏放线杆菌有92%至93%的同源性，与隐秘杆菌属有91%至92%的同源性，与放线菌属有87%至90%的同源性。99%的自展值支持将该放线杆菌属物种与其最接近的邻居（猪放线杆菌）分开的节点。总之，基于表型、基因型和系统发育评估，我们表明来自马赛的分离株是放线杆菌属内一种先前未被识别的生物体，并且我们建议将该生物体归入“马赛放线杆菌”分类单元。
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本文引用的文献
1
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.空位BLAST和位置特异性迭代BLAST：新一代蛋白质数据库搜索程序。
Nucleic Acids Res. 1997 Sep 1;25(17):3389-402. doi: 10.1093/nar/25.17.3389.
2
Characterization of some Actinomyces-like isolates from human clinical specimens: reclassification of Actinomyces suis (Soltys and Spratling) as Actinobaculum suis comb. nov. and description of Actinobaculum schaalii sp. nov.从人类临床标本中分离出的一些类放线菌的鉴定：猪放线菌（Soltys和Spratling）重新分类为猪放线杆菌新组合，以及新种 Schaali 放线杆菌的描述
Int J Syst Bacteriol. 1997 Jul;47(3):899-903. doi: 10.1099/00207713-47-3-899.
3
Nutritional and metabolic features of Eubacterium suis.猪优杆菌的营养与代谢特征
J Clin Microbiol. 1982 May;15(5):895-901. doi: 10.1128/jcm.15.5.895-901.1982.
4
Porcine abortion caused by Actinomyces suis.猪放线菌引起的猪流产。
Vet Pathol. 1988 Jul;25(4):323-4. doi: 10.1177/030098588802500415.
5
Isolation of Eubacterium suis from sows with cystitis.从患有膀胱炎的母猪中分离出猪优杆菌。
J Am Vet Med Assoc. 1989 Oct 15;195(8):1104-7.
6
16S ribosomal DNA amplification for phylogenetic study.用于系统发育研究的16S核糖体DNA扩增。
J Bacteriol. 1991 Jan;173(2):697-703. doi: 10.1128/jb.173.2.697-703.1991.
7
Phylogenetic evidence for the transfer of Eubacterium suis to the genus Actinomyces as Actinomyces suis comb. nov.猪真杆菌转移至放线菌属并命名为猪放线菌（新组合）的系统发育学证据
Int J Syst Bacteriol. 1992 Jan;42(1):161-5. doi: 10.1099/00207713-42-1-161.
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