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通过原子分子动力学模拟理解复杂生物膜

Towards an understanding of complex biological membranes from atomistic molecular dynamics simulations.

作者信息

Saiz Leonor, Bandyopadhyay Sanjoy, Klein Michael L

机构信息

Center for Molecular Modeling and Chemistry Department, University of Pennsylvania, Philadelphia 19104-6323, USA.

出版信息

Biosci Rep. 2002 Apr;22(2):151-73. doi: 10.1023/a:1020130420869.

DOI:10.1023/a:1020130420869
PMID:12428899
Abstract

Computer simulation has emerged as a powerful tool for studying the structural and functional properties of complex biological membranes. In the last few years, the use of recently developed simulation methodologies and current generation force fields has permitted novel applications of molecular dynamics simulations, which have enhanced our understanding of the different physical processes governing biomembrane structure and dynamics. This review focuses on frontier areas of research with important biomedical applications. We have paid special attention to polyunsaturated lipids, membrane proteins and ion channels, surfactant additives in membranes, and lipid-DNA gene transfer complexes.

摘要

计算机模拟已成为研究复杂生物膜结构和功能特性的强大工具。在过去几年中,使用最新开发的模拟方法和当代力场使得分子动力学模拟有了新的应用,这增进了我们对支配生物膜结构和动力学的不同物理过程的理解。本综述聚焦于具有重要生物医学应用的前沿研究领域。我们特别关注了多不饱和脂质、膜蛋白和离子通道、膜中的表面活性剂添加剂以及脂质 - DNA 基因转移复合物。

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Towards an understanding of complex biological membranes from atomistic molecular dynamics simulations.通过原子分子动力学模拟理解复杂生物膜
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Membrane simulations: bigger and better?膜模拟:规模更大、效果更好?
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Reactions at Biomembrane Interfaces.生物膜界面反应。
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Biomembranes in atomistic and coarse-grained simulations.原子尺度和粗粒度模拟中的生物膜
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Continuum descriptions of membranes and their interaction with proteins: Towards chemically accurate models.膜及其与蛋白质相互作用的连续介质描述:迈向化学精确模型。
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