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CD2结构域1的自缔合及15N化学交换加宽的pH依赖性与Glu41的异常pKa相关。

The pH dependence of CD2 domain 1 self-association and 15N chemical exchange broadening is correlated with the anomalous pKa of Glu41.

作者信息

Chen H A, Pfuhl Mark, Driscoll Paul C

机构信息

Department of Biochemistry and Molecular Biology, University College London, Gower Street, United Kingdom.

出版信息

Biochemistry. 2002 Dec 17;41(50):14680-8. doi: 10.1021/bi026447x.

Abstract

We have previously shown using (15)N nuclear relaxation measurements that the concentration-dependent rotational correlation time and chemical exchange broadening for selected resonances of rat CD2 domain 1 (CD2d1) are consistent with a model of low-affinity self-association of the protein molecules. The exchange broadening data, which at high protein concentrations highlight selected nuclei in the major C'-C-F-G beta-sheet face of the immunoglobulin fold, implicate a surface reminiscent of the major lattice contact within crystals of the intact CD2 ectodomain. In a separate study, we have also demonstrated that the beta-strand C' surface-exposed residue Glu41 possesses an anomalously elevated acidity constant (pK(a) = 6.7 at a protein concentration of 1.2 mM). Mutagenesis studies showed that the close contact of residue Glu41 with Glu29 (beta-strand C) is the primary cause of the high pK(a). However, the measured pK(a) of Glu41 also shows a weak dependence on protein concentration, implicating Glu41 in the mechanism of CD2d1 self-association. In the study presented here, we demonstrate a correlation of the pH dependence of the chemical shift and (15)N nuclear relaxation parameters measured for wild-type and mutant forms of CD2d1 with pH and the protonation state of Glu41. Self-association of CD2d1 molecules is promoted whenever the side chain charge of residue 41 is neutralized. These observations are consistent with a model for CD2d1 self-association that corresponds to the crystal structure lattice contact where the interatomic distances are consistent with Glu41 being in the protonated state. This study reinforces the conclusion that residue-specific chemical exchange broadening of protein resonances can arise from weak self-association phenomena. In addition, the electrostatic profile of rat CD2 interfacial residues parallels that of the homologous human CD2 in a manner that suggests a rationalization of similar exchange broadening observations.

摘要

我们之前利用(15)N 核弛豫测量表明,大鼠 CD2 结构域 1(CD2d1)选定共振峰的浓度依赖性旋转相关时间和化学交换展宽与蛋白质分子低亲和力自缔合模型一致。交换展宽数据在高蛋白浓度下突出了免疫球蛋白折叠主要 C'-C-F-Gβ-折叠面中的选定原子核,暗示了一个类似于完整 CD2 胞外域晶体中主要晶格接触的表面。在另一项研究中,我们还证明了β-链 C'表面暴露的残基 Glu41 具有异常升高的酸度常数(在蛋白质浓度为 1.2 mM 时 pK(a)=6.7)。诱变研究表明,残基 Glu41 与 Glu29(β-链 C)的紧密接触是高 pK(a)的主要原因。然而,测得的 Glu41 的 pK(a)也显示出对蛋白质浓度的微弱依赖性,这表明 Glu41 参与了 CD2d1 自缔合机制。在本文所述的研究中,我们证明了针对 CD2d1 的野生型和突变型所测量的化学位移和(15)N 核弛豫参数的 pH 依赖性与 pH 以及 Glu41 的质子化状态之间的相关性。只要残基 41 的侧链电荷被中和,CD2d1 分子的自缔合就会被促进。这些观察结果与 CD2d1 自缔合模型一致,该模型对应于晶体结构晶格接触,其中原子间距离与处于质子化状态的 Glu41 一致。这项研究强化了这样的结论,即蛋白质共振峰的残基特异性化学交换展宽可能源于弱自缔合现象。此外,大鼠 CD2 界面残基的静电分布与同源人类 CD2 的静电分布相似,这表明可以对类似的交换展宽观察结果进行合理化解释。

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