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噬菌体Qβ RNA上外壳蛋白的结合位点。

The binding site for coat protein on bacteriophage Qbeta RNA.

作者信息

Weber H

出版信息

Biochim Biophys Acta. 1976 Jan 19;418(2):175-83. doi: 10.1016/0005-2787(76)90067-8.

DOI:10.1016/0005-2787(76)90067-8
PMID:1247542
Abstract

The site of interaction of phage Qbeta coat protein with Qbeta RNA was determined by ribonuclease T1 degradation of complexes of coat protein and [32P]-RNA obtained by codialysis of the components from urea into buffer solutions. The degraded complexes were recovered by filtration through nitrocellulose filters, and bound [32P]RNA fragments were extracted and separated by polyacrylamide gel electrophoresis. Fingerprinting and further sequence analysis established that the three main fragments obtained (chain lengths 88, 71 and 27 nucleotides) all consist of sequences extending from the intercistronic region to the beginning of the replicase cistron. These results suggest that in the replication of Qbeta, as in the case of R17, coat protein acts as a translational repressor by binding to the ribosomal initiation site of the replicase cistron.

摘要

通过核糖核酸酶T1对噬菌体Qβ外壳蛋白与Qβ RNA复合物的降解来确定外壳蛋白与Qβ RNA的相互作用位点。该复合物是通过将各组分从尿素中透析到缓冲溶液中获得的。通过硝酸纤维素滤膜过滤回收降解后的复合物,提取结合的[32P]RNA片段,并通过聚丙烯酰胺凝胶电泳进行分离。指纹图谱和进一步的序列分析表明,获得的三个主要片段(链长分别为88、71和27个核苷酸)均由从基因间区域延伸至复制酶顺反子起始处的序列组成。这些结果表明,在Qβ的复制过程中,如同R17的情况一样,外壳蛋白通过与复制酶顺反子的核糖体起始位点结合而作为翻译阻遏物发挥作用。

相似文献

1
The binding site for coat protein on bacteriophage Qbeta RNA.噬菌体Qβ RNA上外壳蛋白的结合位点。
Biochim Biophys Acta. 1976 Jan 19;418(2):175-83. doi: 10.1016/0005-2787(76)90067-8.
2
Site-specific interaction of Qbeta host factor and ribosomal protein S1 with Qbeta and R17 bacteriophage RNAs.Qβ宿主因子和核糖体蛋白S1与Qβ和R17噬菌体RNA的位点特异性相互作用。
J Biol Chem. 1976 Apr 10;251(7):1902-12.
3
Nucleotide sequences of fragments of R17 bacteriophage RNA from the region immediately preceding the coat-protein cistron.来自衣壳蛋白顺反子之前紧邻区域的R17噬菌体RNA片段的核苷酸序列。
Eur J Biochem. 1972 Sep 25;29(3):469-79. doi: 10.1111/j.1432-1033.1972.tb02011.x.
4
Nucleotide sequence at the binding site for coat protein on RNA of bacteriophage R17.噬菌体R17 RNA上外壳蛋白结合位点的核苷酸序列。
Proc Natl Acad Sci U S A. 1972 Oct;69(10):3033-7. doi: 10.1073/pnas.69.10.3033.
5
Specific recognition of the isolated R17 replicase initiator region by R17 coat protein.R17外壳蛋白对分离出的R17复制酶起始区域的特异性识别。
Nature. 1974 Mar 15;248(445):223-5. doi: 10.1038/248223a0.
6
Discriminatory ribosome rebinding of isolated regions of protein synthesis initiation from the ribonucleic acid of bacteriophage R17.从噬菌体R17核糖核酸中分离出的蛋白质合成起始区域的歧视性核糖体重新结合。
Proc Natl Acad Sci U S A. 1973 Sep;70(9):2605-9. doi: 10.1073/pnas.70.9.2605.
7
A sequence of 83 nucleotides containing the replicase cistron ribosome binding site of phage Qbeta RNA.一段包含噬菌体Qβ RNA复制酶顺反子核糖体结合位点的83个核苷酸序列。
Eur J Biochem. 1974 Jan 16;41(2):413-20. doi: 10.1111/j.1432-1033.1974.tb03282.x.
8
Nucleotide sequences of similar size from the coliphage R17 genome.来自大肠杆菌噬菌体R17基因组的大小相似的核苷酸序列。
Biochem J. 1973 Mar;131(3):605-10. doi: 10.1042/bj1310605.
9
Escherichia coli ribosomal protein S1 recognizes two sites in bacteriophage Qbeta RNA.大肠杆菌核糖体蛋白S1识别噬菌体Qβ RNA中的两个位点。
J Biol Chem. 1977 Aug 10;252(15):5177-9.
10
Characterization of extended sequences around the coat and replicase cistron ribosome binding sites in phage Q RNA.噬菌体Q RNA中衣壳蛋白和顺反子及复制酶核糖体结合位点周围延伸序列的特征分析
FEBS Lett. 1972 Oct 1;26(1):139-44. doi: 10.1016/0014-5793(72)80560-x.

引用本文的文献

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RNA Phage Biology in a Metagenomic Era.宏基因组时代的 RNA 噬菌体生物学
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2
Structures of Qβ virions, virus-like particles, and the Qβ-MurA complex reveal internal coat proteins and the mechanism of host lysis.Qβ 病毒衣壳、病毒样颗粒和 Qβ-MurA 复合物的结构揭示了内部衣壳蛋白和宿主裂解的机制。
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Evolution of bacteriophage in continuous culture: a model system to test antiviral gene therapies for the emergence of phage escape mutants.连续培养中噬菌体的进化:用于测试抗病毒基因疗法中噬菌体逃逸突变体出现情况的模型系统。
J Virol. 2002 Jun;76(11):5784-92. doi: 10.1128/jvi.76.11.5784-5792.2002.
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The lysis function of RNA bacteriophage Qbeta is mediated by the maturation (A2) protein.RNA噬菌体Qβ的裂解功能由成熟(A2)蛋白介导。
EMBO J. 1983;2(9):1521-6. doi: 10.1002/j.1460-2075.1983.tb01617.x.
6
A "bulged" double helix in a RNA-protein contact site.RNA-蛋白质接触位点处的“鼓出”双螺旋结构。
Proc Natl Acad Sci U S A. 1981 Dec;78(12):7331-5. doi: 10.1073/pnas.78.12.7331.
7
Analysis of the complete nucleotide sequence of the group IV RNA coliphage SP.IV 组 RNA 大肠杆菌噬菌体 SP 的全核苷酸序列分析。
Nucleic Acids Res. 1988 Jul 11;16(13):6205-21. doi: 10.1093/nar/16.13.6205.
8
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J Virol. 1990 Aug;64(8):3872-81. doi: 10.1128/JVI.64.8.3872-3881.1990.
9
Evidence that the packaging signal for nodaviral RNA2 is a bulged stem-loop.证实诺达病毒RNA2的包装信号是一个凸起的茎环结构。
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10
Reverse transcription of phage RNA and its fragment directed by synthetic heteropolymeric primers.由合成杂聚引物指导的噬菌体RNA及其片段的逆转录
Nucleic Acids Res. 1977 Jul;4(7):2145-59. doi: 10.1093/nar/4.7.2145.