Bosshard Philipp P, Zbinden Reinhard, Altwegg Martin
Department of Medical Microbiology, University of Zürich, Gloriastrasse 30/32, 8028 Zürich, Switzerland.
Int J Syst Evol Microbiol. 2002 Nov;52(Pt 6):2241-9. doi: 10.1099/00207713-52-6-2241.
A Gram-positive, facultatively anaerobic, rod-shaped, endospore-forming bacterium (strain MOL722(T)) was characterized using phenotypic and molecular methods. Fatty acid analysis and biochemical examination indicated that the isolate belongs to the Gram-positive bacteria with low DNA G+C content, probably to the genus Paenibacillus. Direct sequencing of the 16S rRNA gene showed ambiguities, suggesting heterogeneity. Cloned 16S rDNA yielded seven different sequences varying at 15 positions, with one being an insertion. The isolate shares 98.5% sequence similarity with Paenibacillus sp. P15-9, but less than 94% similarity with other paenibacilli and bacilli. Phylogenetic analysis with different treeing methods revealed that strain MOL722(T), together with Paenibacillus sp. P15-9, forms a novel monophyletic clade within the genus Paenibacillus. Based on phenotypic and phylogenetic evidence, it is proposed that the unknown bacterium is classified as the novel species Paenibacillus turicensis sp. nov., the type strain of which is strain MOL722(T) (= DSM 14349(T) = NCCB 100011(T)).
利用表型和分子方法对一株革兰氏阳性、兼性厌氧、杆状、产芽孢细菌(菌株MOL722(T))进行了鉴定。脂肪酸分析和生化检测表明,该分离株属于低DNA G+C含量的革兰氏阳性菌,可能属于类芽孢杆菌属。16S rRNA基因的直接测序显示存在模糊性,表明存在异质性。克隆的16S rDNA产生了7个不同的序列,在15个位置上存在差异,其中一个是插入序列。该分离株与类芽孢杆菌属菌株P15-9的序列相似性为98.5%,但与其他类芽孢杆菌和芽孢杆菌的相似性低于94%。采用不同的建树方法进行系统发育分析表明,菌株MOL722(T)与类芽孢杆菌属菌株P15-9在类芽孢杆菌属内形成一个新的单系分支。基于表型和系统发育证据,建议将该未知细菌分类为新物种图尔库类芽孢杆菌(Paenibacillus turicensis sp. nov.),其模式菌株为菌株MOL722(T)(= DSM 14349(T) = NCCB 100011(T))。