Suppr超能文献

去帽蛋白增强子Edc1p和Edc2p可结合RNA并刺激去帽酶的活性。

The enhancer of decapping proteins, Edc1p and Edc2p, bind RNA and stimulate the activity of the decapping enzyme.

作者信息

Schwartz David, Decker Carolyn J, Parker Roy

机构信息

Department of Molecular and Cellular Biology and Howard Hughes Medical Institute, University of Arizona, 1007 E. Lowell Street, Tucson, AZ 85704, USA.

出版信息

RNA. 2003 Feb;9(2):239-51. doi: 10.1261/rna.2171203.

Abstract

A major pathway of eukaryotic mRNA turnover initiates with deadenylation, which allows a decapping reaction leading to 5'-3' exonucleolytic degradation. A key control point in this pathway is the decapping of the mRNA. Two proteins, Edc1 and Edc2, were genetically identified previously as enhancers of the decapping reaction. In this work, we demonstrate that Edc1p and Edc2p are RNA-binding proteins. In addition, recombinant Edc1p or Edc2p stimulates mRNA decapping in cell-free extracts or with purified decapping enzyme. These results suggest that Edc1p and Edc2p activate decapping directly by binding to the mRNA substrate and enhancing the activity of the decapping enzyme. Interestingly, edc1Delta strains show defects in utilization of glycerol as a carbon source and misregulation of several mRNAs in response to carbon-source changes. This identifies a critical role for decapping and Edc1p in alterations of gene expression in response to carbon-source changes.

摘要

真核生物mRNA周转的一条主要途径始于去腺苷酸化,这会引发脱帽反应,进而导致5'-3'核酸外切酶降解。该途径中的一个关键控制点是mRNA的脱帽。此前通过遗传学方法鉴定出两种蛋白质Edc1和Edc2是脱帽反应的增强子。在这项研究中,我们证明Edc1p和Edc2p是RNA结合蛋白。此外,重组的Edc1p或Edc2p在无细胞提取物中或与纯化的脱帽酶一起使用时,能刺激mRNA脱帽。这些结果表明,Edc1p和Edc2p通过与mRNA底物结合并增强脱帽酶的活性来直接激活脱帽。有趣的是,edc1Δ菌株在利用甘油作为碳源方面存在缺陷,并且在响应碳源变化时,几种mRNA的调控出现异常。这确定了脱帽和Edc1p在响应碳源变化时基因表达改变中的关键作用。

相似文献

2
Two related proteins, Edc1p and Edc2p, stimulate mRNA decapping in Saccharomyces cerevisiae.
Genetics. 2001 Jan;157(1):27-37. doi: 10.1093/genetics/157.1.27.
3
Analysis of recombinant yeast decapping enzyme.
RNA. 2003 Feb;9(2):231-8. doi: 10.1261/rna.2151403.
4
Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae.
Annu Rev Biochem. 2000;69:571-95. doi: 10.1146/annurev.biochem.69.1.571.
5
Isolation and characterization of Dcp1p, the yeast mRNA decapping enzyme.
EMBO J. 1998 Mar 2;17(5):1487-96. doi: 10.1093/emboj/17.5.1487.
6
7
Sbp1p affects translational repression and decapping in Saccharomyces cerevisiae.
Mol Cell Biol. 2006 Jul;26(13):5120-30. doi: 10.1128/MCB.01913-05.
9
Monitoring mRNA decapping activity.
Methods. 1999 Jan;17(1):46-51. doi: 10.1006/meth.1998.0706.
10
The yeast EDC1 mRNA undergoes deadenylation-independent decapping stimulated by Not2p, Not4p, and Not5p.
EMBO J. 2005 Mar 9;24(5):1033-45. doi: 10.1038/sj.emboj.7600560. Epub 2005 Feb 10.

引用本文的文献

1
Eukaryotic mRNA decapping factors: molecular mechanisms and activity.
FEBS J. 2023 Nov;290(21):5057-5085. doi: 10.1111/febs.16626. Epub 2022 Sep 30.
2
Eukaryotic mRNA Decapping Activation.
Front Genet. 2022 Mar 23;13:832547. doi: 10.3389/fgene.2022.832547. eCollection 2022.
3
YvcI from has RNA pyrophosphohydrolase activity.
J Biol Chem. 2019 Dec 27;294(52):19967-19977. doi: 10.1074/jbc.RA119.011485. Epub 2019 Nov 18.
4
mRNA decapping: finding the right structures.
Philos Trans R Soc Lond B Biol Sci. 2018 Nov 5;373(1762):20180164. doi: 10.1098/rstb.2018.0164.
5
Life and Death of mRNA Molecules in .
Front Cell Infect Microbiol. 2018 Jun 19;8:199. doi: 10.3389/fcimb.2018.00199. eCollection 2018.
6
P-Bodies: Composition, Properties, and Functions.
Biochemistry. 2018 May 1;57(17):2424-2431. doi: 10.1021/acs.biochem.7b01162. Epub 2018 Jan 30.
7
The interplay between transcription and mRNA degradation in .
Microb Cell. 2017 Jul 3;4(7):212-228. doi: 10.15698/mic2017.07.580.
8
Use of Cellular Decapping Activators by Positive-Strand RNA Viruses.
Viruses. 2016 Dec 21;8(12):340. doi: 10.3390/v8120340.
10
Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat Struct Mol Biol. 2016 Jun;23(6):574-9. doi: 10.1038/nsmb.3232. Epub 2016 May 16.

本文引用的文献

1
Analysis of recombinant yeast decapping enzyme.
RNA. 2003 Feb;9(2):231-8. doi: 10.1261/rna.2151403.
2
Coordinate regulation of sugar flux and translation by PAS kinase.
Cell. 2002 Oct 4;111(1):17-28. doi: 10.1016/s0092-8674(02)00974-1.
3
Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F.
J Mol Biol. 2002 May 10;318(4):951-62. doi: 10.1016/S0022-2836(02)00162-6.
4
The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1.
EMBO J. 2002 Jun 3;21(11):2788-97. doi: 10.1093/emboj/21.11.2788.
7
Yeast mRNA decapping enzyme.
Methods Enzymol. 2001;342:226-33. doi: 10.1016/s0076-6879(01)42547-x.
8
Computational modeling of eukaryotic mRNA turnover.
RNA. 2001 Sep;7(9):1192-212. doi: 10.1017/s1355838201010330.
9
The cap-to-tail guide to mRNA turnover.
Nat Rev Mol Cell Biol. 2001 Apr;2(4):237-46. doi: 10.1038/35067025.
10
Regulation of mRNA stability in mammalian cells.
Gene. 2001 Mar 7;265(1-2):11-23. doi: 10.1016/s0378-1119(01)00350-x.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验