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监测mRNA脱帽活性。

Monitoring mRNA decapping activity.

作者信息

Zhang S, Williams C J, Wormington M, Stevens A, Peltz S W

机构信息

Department of Molecular Genetics and Microbiology, Robert Wood Johnson Medical School, Piscataway, New Jersey 08854, USA.

出版信息

Methods. 1999 Jan;17(1):46-51. doi: 10.1006/meth.1998.0706.

DOI:10.1006/meth.1998.0706
PMID:10075882
Abstract

mRNA decapping is a common step shared between two important mRNA decay pathways in yeast, Saccharomyces cerevisiae. To investigate how mRNAs are decapped, we have developed an assay that can be easily used to measure the decapping activity. This assay has been used to isolate yeast strains with altered decapping activities. The results demonstrated that decreased decapping activity in vitro corresponds well with the decapping-deficient phenotype in vivo. This assay has been applied to the purified yeast decapping enzyme Dcp1 protein as well as crude yeast extracts and Xenopus oocyte extracts.

摘要

mRNA去帽是酿酒酵母(Saccharomyces cerevisiae)中两条重要的mRNA降解途径共有的一个常见步骤。为了研究mRNA是如何去帽的,我们开发了一种易于用于测量去帽活性的检测方法。该检测方法已被用于分离具有改变的去帽活性的酵母菌株。结果表明,体外去帽活性的降低与体内去帽缺陷表型高度吻合。该检测方法已应用于纯化的酵母去帽酶Dcp1蛋白以及粗制酵母提取物和非洲爪蟾卵母细胞提取物。

相似文献

1
Monitoring mRNA decapping activity.监测mRNA脱帽活性。
Methods. 1999 Jan;17(1):46-51. doi: 10.1006/meth.1998.0706.
2
Isolation and characterization of Dcp1p, the yeast mRNA decapping enzyme.酵母mRNA去帽酶Dcp1p的分离与鉴定。
EMBO J. 1998 Mar 2;17(5):1487-96. doi: 10.1093/emboj/17.5.1487.
3
An essential component of the decapping enzyme required for normal rates of mRNA turnover.正常mRNA周转率所需的脱帽酶的一个重要组成部分。
Nature. 1996 Aug 15;382(6592):642-6. doi: 10.1038/382642a0.
4
Decapping reaction of mRNA requires Dcp1 in fission yeast: its characterization in different species from yeast to human.裂殖酵母中mRNA的去帽反应需要Dcp1:其在从酵母到人类的不同物种中的特性研究。
J Biochem. 2004 Dec;136(6):805-12. doi: 10.1093/jb/mvh190.
5
Yeast Sm-like proteins function in mRNA decapping and decay.酵母Sm样蛋白在mRNA脱帽和降解过程中发挥作用。
Nature. 2000 Mar 30;404(6777):515-8. doi: 10.1038/35006676.
6
Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F.通过帽结合翻译复合体eIF4F对真核生物mRNA稳定性的调控。
J Mol Biol. 2002 May 10;318(4):951-62. doi: 10.1016/S0022-2836(02)00162-6.
7
Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae.酿酒酵母中mRNA脱帽的机制与调控
Annu Rev Biochem. 2000;69:571-95. doi: 10.1146/annurev.biochem.69.1.571.
8
New insights into the control of mRNA decapping.对mRNA去帽调控的新见解。
Trends Biochem Sci. 2006 May;31(5):241-3. doi: 10.1016/j.tibs.2006.03.001. Epub 2006 Mar 31.
9
mRNA decapping activities and their biological roles.信使核糖核酸脱帽活性及其生物学作用。
Biochimie. 1996;78(11-12):1049-55. doi: 10.1016/s0300-9084(97)86729-6.
10
Purification and analysis of the decapping activator Lsm1p-7p-Pat1p complex from yeast.从酵母中纯化和分析去帽激活因子Lsm1p-7p-Pat1p复合物。
Methods Enzymol. 2008;448:41-55. doi: 10.1016/S0076-6879(08)02603-7.

引用本文的文献

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The maternal-to-zygotic transition: reprogramming of the cytoplasm and nucleus.母源-合子转变:细胞质与细胞核的重编程
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2
Biochemical Characterization of Yeast Xrn1.酵母 Xrn1 的生化特性分析。
Biochemistry. 2020 Apr 21;59(15):1493-1507. doi: 10.1021/acs.biochem.9b01035. Epub 2020 Apr 13.
3
ME31B globally represses maternal mRNAs by two distinct mechanisms during the maternal-to-zygotic transition.ME31B 在母胎向合子的过渡过程中通过两种不同的机制全局抑制母体 mRNA。
Elife. 2017 Sep 6;6:e27891. doi: 10.7554/eLife.27891.
4
CPEB and miR-15/16 Co-Regulate Translation of Cyclin E1 mRNA during Xenopus Oocyte Maturation.在非洲爪蟾卵母细胞成熟过程中,CPEB与miR-15/16共同调控细胞周期蛋白E1信使核糖核酸的翻译。
PLoS One. 2016 Feb 1;11(2):e0146792. doi: 10.1371/journal.pone.0146792. eCollection 2016.
5
The Maternal-to-Zygotic Transition During Vertebrate Development: A Model for Reprogramming.脊椎动物发育过程中的母源-合子转变:一种重编程模型
Curr Top Dev Biol. 2015;113:191-232. doi: 10.1016/bs.ctdb.2015.07.020. Epub 2015 Aug 13.
6
P-body assembly requires DDX6 repression complexes rather than decay or Ataxin2/2L complexes.P小体组装需要DDX6抑制复合物,而非降解复合物或Ataxin2/2L复合物。
Mol Biol Cell. 2015 Jul 15;26(14):2579-95. doi: 10.1091/mbc.E15-03-0136. Epub 2015 May 20.
7
Lsm2 and Lsm3 bridge the interaction of the Lsm1-7 complex with Pat1 for decapping activation.Lsm2 和 Lsm3 将 Lsm1-7 复合物与 Pat1 的相互作用桥接起来,以激活去帽。
Cell Res. 2014 Feb;24(2):233-46. doi: 10.1038/cr.2013.152. Epub 2013 Nov 19.
8
The RNA-binding protein Y14 inhibits mRNA decapping and modulates processing body formation.RNA 结合蛋白 Y14 抑制 mRNA 去帽化并调节细胞质体形成。
Mol Biol Cell. 2013 Jan;24(1):1-13. doi: 10.1091/mbc.E12-03-0217. Epub 2012 Oct 31.
9
Genome-wide analysis of GLD-1-mediated mRNA regulation suggests a role in mRNA storage.GLD-1 介导的 mRNA 调控的全基因组分析表明其在 mRNA 储存中起作用。
PLoS Genet. 2012 May;8(5):e1002742. doi: 10.1371/journal.pgen.1002742. Epub 2012 May 31.
10
The protein Zfand5 binds and stabilizes mRNAs with AU-rich elements in their 3'-untranslated regions.蛋白 Zfand5 结合并稳定含有富含 AU 元件的 3'非翻译区的 mRNAs。
J Biol Chem. 2012 Jul 20;287(30):24967-77. doi: 10.1074/jbc.M112.362020. Epub 2012 Jun 4.