Hansson Lotta, Rabbani Hodjattallah, Fagerberg Jan, Osterborg Anders, Mellstedt Håkan
Department of Hematology, Karolinska Hospital, Stockholm, Sweden.
Blood. 2003 Jun 15;101(12):4930-6. doi: 10.1182/blood-2002-04-1250. Epub 2003 Feb 6.
The idiotypic structure of the monoclonal immunoglobulin (Ig) in multiple myeloma (MM) might be regarded as a tumor-specific antigen. The present study was designed to identify T-cell epitopes of the variable region of the Ig heavy chain (VH) in MM (n = 5) using bioinformatics and analyze the presence of naturally occurring T cells against idiotype-derived peptides. A large number of human-leukocyte-antigen (HLA)-binding (class I and II) peptides were identified. The frequency of predicted epitopes depended on the database used: 245 in bioinformatics and molecular analysis section (BIMAS) and 601 in SYFPEITHI. Most of the peptides displayed a binding half-life or score in the low or intermediate affinity range. The majority of the predicted peptides were complementarity-determining region (CDR)-rather than framework region (FR)-derived (52%-60% vs 40%-48%, respectively). Most of the predicted peptides were confined to the CDR2-FR3-CDR3 "geographic" region of the Ig-VH region (70%), and significantly fewer peptides were found within the flanking (FR1-CDR1-FR2 and FR4) regions (P <.01). There were 8- to 10-amino acid (aa) long peptides corresponding to the CDRs and fitting to the actual HLA-A/B haplotypes that spontaneously recognized, albeit with a low magnitude, type I T cells (interferon gamma), indicating an ongoing major histocompatibility complex (MHC) class I-restricted T-cell response. Most of those peptides had a low binding half-life (BIMAS) and a low/intermediate score (SYFPEITHI). Furthermore, 15- to 20-aa long CDR1-3-derived peptides also spontaneously recognized type I T cells, indicating the presence of MHC class II-restricted T cells as well. This study demonstrates that a large number of HLA-binding idiotypic peptides can be identified in patients with MM. Such peptides may spontaneously induce a type I MHC class I- as well as class II-restricted memory T-cell response.
多发性骨髓瘤(MM)中单克隆免疫球蛋白(Ig)的独特型结构可被视为肿瘤特异性抗原。本研究旨在利用生物信息学鉴定MM患者(n = 5)中Ig重链(VH)可变区的T细胞表位,并分析针对独特型衍生肽的天然T细胞的存在情况。鉴定出了大量人白细胞抗原(HLA)结合(I类和II类)肽。预测表位的频率取决于所使用的数据库:生物信息学和分子分析部分(BIMAS)中有245个,SYFPEITHI中有601个。大多数肽在低或中等亲和力范围内显示结合半衰期或评分。大多数预测肽来自互补决定区(CDR)而非框架区(FR)(分别为52% - 60%对40% - 48%)。大多数预测肽局限于Ig - VH区的CDR2 - FR3 - CDR3“地理”区域(70%),而侧翼(FR1 - CDR1 - FR2和FR4)区域中发现的肽明显较少(P <.01)。有对应于CDR且长度为8至10个氨基酸(aa)并适合实际HLA - A/B单倍型的肽,尽管反应程度较低,但能自发识别I型T细胞(干扰素γ),表明存在正在进行的主要组织相容性复合体(MHC)I类限制性T细胞反应。这些肽大多数具有低结合半衰期(BIMAS)和低/中等评分(SYFPEITHI)。此外,长度为15至20个aa的CDR1 - 3衍生肽也能自发识别I型T细胞,表明也存在MHC II类限制性T细胞。本研究表明,MM患者中可鉴定出大量HLA结合独特型肽。此类肽可能自发诱导I型MHC I类以及II类限制性记忆T细胞反应。