Czinki Eszter, Császár Attila G
Department of Theoretical Chemistry, Eötvös University, 1518 Budapest 112, P.O. Box 32, Hungary.
Chemistry. 2003 Feb 17;9(4):1008-19. doi: 10.1002/chem.200390103.
Accurate geometries, relative energies, rotational and quartic centrifugal distortion constants, dipole moments, harmonic vibrational frequencies, and infrared intensities were determined from ab initio electronic structure calculations for eighteen conformers of the neutral form of the amino acid L-proline. Only four conformers have notable population at low and moderate temperature. The second most stable conformer is only 2+/-2 kJ mol(-1) above the global minimum, while the third and fourth conformers are nearly degenerate and have an excess energy of 7+/-2 kJ mol(-1) relative to the global minimum. All four conformers have one hydrogen bond: N.HO in the lower energy pair of conformers, and NH.O in the higher energy pair of conformers. The conformer pairs differ only in their ring puckering. The relative energies of the conformers include corrections for valence electron correlation, extrapolated to the complete basis set limit, as well as core correlation and relativistic effects. Structural features of the pyrrolidine ring of proline are discussed by using the concept of pseudorotation. The accurate rotational and quartic centrifugal distortion constants as well as the vibrational frequencies and infrared intensities should aid identification and characterization of the conformers of L-proline by rotational and vibrational spectroscopy, respectively. Bonding features of L-proline, especially intramolecular hydrogen bonds, were investigated by the atoms-in-molecules (AIM) technique.
通过从头算电子结构计算,确定了氨基酸L-脯氨酸中性形式的18种构象异构体的精确几何结构、相对能量、转动和四次离心畸变常数、偶极矩、简正振动频率以及红外强度。在低温和中温下,只有四种构象异构体具有显著的丰度。第二稳定的构象异构体仅比全局最小值高2±2 kJ/mol,而第三和第四构象异构体几乎简并,相对于全局最小值具有7±2 kJ/mol的过剩能量。所有四种构象异构体都有一个氢键:能量较低的一对构象异构体中为N…HO,能量较高的一对构象异构体中为NH…O。这两对构象异构体仅在环的褶皱方面有所不同。构象异构体的相对能量包括对价电子相关的校正,外推到完全基组极限,以及核心相关和相对论效应。利用赝旋转的概念讨论了脯氨酸吡咯烷环的结构特征。精确的转动和四次离心畸变常数以及振动频率和红外强度应分别有助于通过转动光谱和振动光谱对L-脯氨酸的构象异构体进行识别和表征。利用分子中的原子(AIM)技术研究了L-脯氨酸的键合特征,特别是分子内氢键。