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一种毒物的驯化:镍铁氢化酶氰化物配体的生物合成

Taming of a poison: biosynthesis of the NiFe-hydrogenase cyanide ligands.

作者信息

Reissmann Stefanie, Hochleitner Elisabeth, Wang Haofan, Paschos Athanasios, Lottspeich Friedrich, Glass Richard S, Böck August

机构信息

Department Biologie I, Mikrobiologie, University of Munich, Maria-Ward-Strasse 1a, D-80638 Munich, Germany.

出版信息

Science. 2003 Feb 14;299(5609):1067-70. doi: 10.1126/science.1080972.

DOI:10.1126/science.1080972
PMID:12586941
Abstract

NiFe-hydrogenases have an Ni-Fe site in which the iron has one CO and two CN groups as ligands. Synthesis of the CN ligands requires the activity of two hydrogenase maturation proteins: HypF and HypE. HypF is a carbamoyltransferase that transfers the carbamoyl moiety of carbamoyladenylate to the COOH-terminal cysteine of HypE and thus forms an enzyme-thiocarbamate. HypE dehydrates the S-carbamoyl moiety in an adenosine triphosphate-dependent process to yield the enzyme thiocyanate. Chemical model reactions corroborate the feasibility of this unprecedented biosynthetic route and show that thiocyanates can donate CN to iron. This finding underscores a striking parallel between biochemistry and organometallic chemistry in the formation of an iron-cyano complex.

摘要

镍铁氢化酶有一个镍铁位点,其中铁有一个一氧化碳和两个氰基作为配体。氰基配体的合成需要两种氢化酶成熟蛋白的活性:HypF和HypE。HypF是一种氨甲酰基转移酶,它将氨甲酰腺苷酸的氨甲酰部分转移到HypE的羧基末端半胱氨酸上,从而形成一种酶-硫代氨基甲酸盐。HypE在一个依赖三磷酸腺苷的过程中使S-氨甲酰部分脱水,生成酶硫氰酸盐。化学模型反应证实了这条前所未有的生物合成途径的可行性,并表明硫氰酸盐可以向铁提供氰基。这一发现突出了在形成铁氰配合物过程中生物化学与有机金属化学之间惊人的相似性。

相似文献

1
Taming of a poison: biosynthesis of the NiFe-hydrogenase cyanide ligands.一种毒物的驯化:镍铁氢化酶氰化物配体的生物合成
Science. 2003 Feb 14;299(5609):1067-70. doi: 10.1126/science.1080972.
2
The complex between hydrogenase-maturation proteins HypC and HypD is an intermediate in the supply of cyanide to the active site iron of [NiFe]-hydrogenases.氢化酶成熟蛋白HypC和HypD之间的复合物是向[NiFe] -氢化酶活性位点铁供应氰化物过程中的一个中间体。
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Maturation of [NiFe]-hydrogenases in Escherichia coli.大肠杆菌中[NiFe]氢化酶的成熟
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Carbamoylphosphate serves as the source of CN(-), but not of the intrinsic CO in the active site of the regulatory [NiFe]-hydrogenase from Ralstonia eutropha.氨甲酰磷酸是嗜麦芽窄食单胞菌中调节型[NiFe]氢化酶活性位点中CN(-)的来源,但不是其内在CO的来源。
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The CO and CN(-) ligands to the active site Fe in [NiFe]-hydrogenase of Escherichia coli have different metabolic origins.大肠杆菌[NiFe]氢化酶活性位点铁上的CO和CN(-)配体具有不同的代谢来源。
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HypD is the scaffold protein for Fe-(CN)2CO cofactor assembly in [NiFe]-hydrogenase maturation.HypD 是 [NiFe]-氢化酶成熟过程中 Fe-(CN)2CO 辅因子组装的支架蛋白。
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[NiFe]-hydrogenase maturation: isolation of a HypC-HypD complex carrying diatomic CO and CN- ligands.[NiFe]-氢化酶成熟:携带双原子 CO 和 CN-配体的 HypC-HypD 复合物的分离。
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Structure of hydrogenase maturation protein HypF with reaction intermediates shows two active sites.氢化酶成熟蛋白 HypF 与反应中间体的结构显示两个活性位点。
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The crystal structure of [Fe]-hydrogenase reveals the geometry of the active site.[铁]氢化酶的晶体结构揭示了活性位点的几何形状。
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Analysis of the transcarbamoylation-dehydration reaction catalyzed by the hydrogenase maturation proteins HypF and HypE.对氢化酶成熟蛋白HypF和HypE催化的转氨甲酰化-脱水反应的分析。
Eur J Biochem. 2004 Aug;271(16):3428-36. doi: 10.1111/j.1432-1033.2004.04280.x.

引用本文的文献

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A conserved aspartate residue in [4Fe-4S]-containing HypD is required for [NiFe]-cofactor biosynthesis and for efficient interaction of the HypCD scaffold complex with HypE.含[4Fe-4S]的HypD中一个保守的天冬氨酸残基对于[NiFe]辅因子生物合成以及HypCD支架复合物与HypE的有效相互作用是必需的。
Metallomics. 2025 Jun 3;17(6). doi: 10.1093/mtomcs/mfaf014.
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ATP-Triggered Fe(CN)CO Synthon Transfer from the Maturase HypCD to the Active Site of Apo-[NiFe]-Hydrogenase.
ATP 触发的成熟酶 HypCD 到脱辅基-[NiFe]-氢化酶活性部位的 Fe(CN)CO 前体转移。
J Am Chem Soc. 2024 Nov 13;146(45):30976-30989. doi: 10.1021/jacs.4c09791. Epub 2024 Nov 3.
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Promising approaches for the assembly of the catalytically active, recombinant Desulfomicrobium baculatum hydrogenase with substitutions at the active site.具有替代活性位点的催化活性重组脱硫微小杆菌氢化酶的组装有希望的方法。
Microb Cell Fact. 2023 Jul 21;22(1):134. doi: 10.1186/s12934-023-02127-w.
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