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Modelling of photointermediates suggests a mechanism of the flip of the beta-ionone moiety of the retinylidene chromophore in the rhodopsin photocascade.

作者信息

Ishiguro Masaji, Hirano Takahiro, Oyama Yoshiaki

机构信息

Suntory Institute for Bioorganic Research, Shimamoto, Osaka 618-8503, Japan.

出版信息

Chembiochem. 2003 Mar 3;4(2-3):228-31. doi: 10.1002/cbic.200390037.

DOI:10.1002/cbic.200390037
PMID:12616639
Abstract
摘要

相似文献

1
Modelling of photointermediates suggests a mechanism of the flip of the beta-ionone moiety of the retinylidene chromophore in the rhodopsin photocascade.
Chembiochem. 2003 Mar 3;4(2-3):228-31. doi: 10.1002/cbic.200390037.
2
Primary events in dim light vision: a chemical and spectroscopic approach toward understanding protein/chromophore interactions in rhodopsin.暗光视觉中的主要事件：一种理解视紫红质中蛋白质/发色团相互作用的化学和光谱学方法。
Chem Rec. 2004;4(2):120-35. doi: 10.1002/tcr.20000.
3
Relative orientation between the beta-ionone ring and the polyene chain for the chromophore of rhodopsin in native membranes.天然膜中视紫红质发色团的β-紫罗兰酮环与多烯链之间的相对取向。
Biochemistry. 2002 Jun 18;41(24):7549-55. doi: 10.1021/bi020007o.
4
Electrostatic interaction between retinylidene chromophore and opsin in rhodopsin studied by fluorinated rhodopsin analogues.通过氟化视紫红质类似物研究视紫红质中视黄醛发色团与视蛋白之间的静电相互作用。
Biochemistry. 1987 Jul 14;26(14):4422-8. doi: 10.1021/bi00388a035.
5
Dynamic structure of retinylidene ligand of rhodopsin probed by molecular simulations.通过分子模拟探究视紫红质视黄醛配体的动态结构。
J Mol Biol. 2007 Sep 28;372(4):906-917. doi: 10.1016/j.jmb.2007.06.047. Epub 2007 Jun 26.
6
The role of the non-covalent β-ionone-ring binding site in rhodopsin: historical and physiological perspective.视紫红质中非共价β-紫罗兰酮环结合位点的作用：历史与生理学视角
Photochem Photobiol Sci. 2015 Nov;14(11):1932-40. doi: 10.1039/c5pp00158g.
7
Biological applications of picosecond spectroscopy: on the early picosecond intermediates of the visual chromophore-rhodopsin.皮秒光谱学的生物学应用：关于视觉发色团 - 视紫红质的早期皮秒中间体
Prog Clin Biol Res. 1982;102 Pt B:461-77.
8
Binding of more than one retinoid to visual opsins.一种以上维 A 类化合物与视觉视蛋白的结合。
Biophys J. 2010 Oct 6;99(7):2366-73. doi: 10.1016/j.bpj.2010.08.003.
9
Conformational similarities in the beta-ionone ring region of the rhodopsin chromophore in its ground state and after photoactivation to the metarhodopsin-I intermediate.视紫红质发色团在基态以及光激活后形成间视紫红质-I中间体时，其β-紫罗兰酮环区域的构象相似性。
Biochemistry. 2003 Nov 25;42(46):13371-8. doi: 10.1021/bi0354029.
10
Structural models of the photointermediates in the rhodopsin photocascade, lumirhodopsin, metarhodopsin I, and metarhodopsin II.视紫红质光级联反应中的光中间体、发光视紫红质、视紫红质I和视紫红质II的结构模型。
Chembiochem. 2004 Mar 5;5(3):298-310. doi: 10.1002/cbic.200300668.

引用本文的文献

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Mechanism of signal propagation upon retinal isomerization: insights from molecular dynamics simulations of rhodopsin restrained by normal modes.视网膜异构化时的信号传播机制：来自基于简正模式约束的视紫红质分子动力学模拟的见解
Biophys J. 2008 Jul;95(2):789-803. doi: 10.1529/biophysj.107.120691. Epub 2008 Apr 4.
2
Possible role of the 11-cis-retinyl conformation in controlling the dual decay processes of excited rhodopsin.11-顺式视黄醛构象在控制视紫红质激发态双重衰变过程中的可能作用。
Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):10783-7. doi: 10.1073/pnas.0501665102. Epub 2005 Jul 25.
3
Resonance Raman analysis of the mechanism of energy storage and chromophore distortion in the primary visual photoproduct.
初级视觉光产物中能量存储及发色团畸变机制的共振拉曼分析
Biochemistry. 2004 Aug 31;43(34):10867-76. doi: 10.1021/bi0400148.
4
The molecular basis for the high photosensitivity of rhodopsin.视紫红质高感光性的分子基础。
Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):14639-44. doi: 10.1073/pnas.2536769100. Epub 2003 Dec 1.