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利用高通量定向诱导基因组局部突变技术大规模发现诱导点突变

Large-scale discovery of induced point mutations with high-throughput TILLING.

作者信息

Till Bradley J, Reynolds Steven H, Greene Elizabeth A, Codomo Christine A, Enns Linda C, Johnson Jessica E, Burtner Chris, Odden Anthony R, Young Kim, Taylor Nicholas E, Henikoff Jorja G, Comai Luca, Henikoff Steven

机构信息

Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.

出版信息

Genome Res. 2003 Mar;13(3):524-30. doi: 10.1101/gr.977903.

Abstract

TILLING (Targeting Induced Local Lesions in Genomes) is a general reverse-genetic strategy that provides an allelic series of induced point mutations in genes of interest. High-throughput TILLING allows the rapid and low-cost discovery of induced point mutations in populations of chemically mutagenized individuals. As chemical mutagenesis is widely applicable and mutation detection for TILLING is dependent only on sufficient yield of PCR products, TILLING can be applied to most organisms. We have developed TILLING as a service to the Arabidopsis community known as the Arabidopsis TILLING Project (ATP). Our goal is to rapidly deliver allelic series of ethylmethanesulfonate-induced mutations in target 1-kb loci requested by the international research community. In the first year of public operation, ATP has discovered, sequenced, and delivered >1000 mutations in >100 genes ordered by Arabidopsis researchers. The tools and methodologies described here can be adapted to create similar facilities for other organisms.

摘要

定向诱导基因组局部突变(TILLING)是一种通用的反向遗传学策略,可在目标基因中提供一系列诱导点突变。高通量TILLING能够快速且低成本地在化学诱变个体群体中发现诱导点突变。由于化学诱变具有广泛的适用性,且TILLING的突变检测仅依赖于PCR产物的足够产量,因此TILLING可应用于大多数生物。我们已将TILLING开发成一项服务,提供给拟南芥研究群体,即拟南芥TILLING项目(ATP)。我们的目标是迅速交付国际研究群体所要求的、在目标1千碱基位点上由甲基磺酸乙酯诱导产生的一系列等位基因突变。在公开运行的第一年,ATP已发现、测序并交付了拟南芥研究人员订购的100多个基因中的1000多个突变。这里描述的工具和方法可加以调整,为其他生物创建类似的设施。

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