Repasky Matthew P, Guimarães Cristiano Ruch Werneck, Chandrasekhar Jayaraman, Tirado-Rives Julian, Jorgensen William L
Department of Chemistry, Yale University, 225 Prospect Street, New Haven, CT 06520-8107, USA.
J Am Chem Soc. 2003 Jun 4;125(22):6663-72. doi: 10.1021/ja021423z.
Solvent effects on the rate of the Claisen rearrangement of chorismate to prephenate have been examined in water and methanol. The preequilibrium free-energy differences between diaxial and diequatorial conformers of chorismate, which had previously been implicated as the sole basis for the observed 100-fold rate increase in water over methanol, have been reframed using the near attack conformation (NAC) concept of Bruice and co-workers. Using a combined QM/MM Monte Carlo/free-energy perturbation (MC/FEP) method, 82%, 57%, and 1% of chorismate conformers were found to be NAC structures (NACs) in water, methanol, and the gas phase, respectively. As a consequence, the conversion of non-NACs to NACs provides no free-energy contributions to the overall relative reaction rates in water versus methanol. Free-energy perturbation calculations yielded differences in free energies of activation for the two polar protic solvents and the gas phase. The rate enhancement in water over the gas phase arises from preferential hydration of the transition state (TS) relative to the reactants via increased hydrogen bonding and long-range electrostatic interactions, which accompany bringing the two negatively charged carboxylates into closer proximity. More specifically, there is an increase of 1.3 and 0.6 hydrogen bonds to the carboxylate groups and the ether oxygen, respectively, in going from the reactant to the TS in water. In methanol, the corresponding changes in hydrogen bonding with first shell solvent molecules are small; the rate enhancement arises primarily from the enhanced long-range interactions with solvent molecules. Thus, the reaction occurs faster in water than in methanol due to greater stabilization of the TS in water by specific interactions with first shell solvent molecules.
已在水和甲醇中研究了溶剂对分支酸重排为预苯酸反应速率的影响。分支酸的双轴构象和双平伏键构象之间的预平衡自由能差,此前被认为是观察到的在水中反应速率比在甲醇中快100倍的唯一原因,现在已根据布鲁斯及其同事提出的近攻击构象(NAC)概念重新阐释。使用量子力学/分子力学蒙特卡罗/自由能微扰(QM/MM MC/FEP)组合方法,发现在水、甲醇和气相中,分别有82%、57%和1%的分支酸构象为NAC结构(NACs)。因此,非NACs向NACs的转化对水和甲醇中整体相对反应速率没有自由能贡献。自由能微扰计算得出了两种质子性极性溶剂和气相的活化自由能差异。相对于反应物,水相中的过渡态(TS)通过增加氢键和长程静电相互作用而优先水合,这使得两个带负电荷的羧酸盐靠得更近,从而导致水相对于气相的反应速率提高。更具体地说,在水中从反应物转变为TS时,与羧酸盐基团和醚氧的氢键分别增加了1.3个和0.6个。在甲醇中,与第一溶剂化层溶剂分子的氢键相应变化很小;反应速率的提高主要源于与溶剂分子增强的长程相互作用。因此,由于第一溶剂化层溶剂分子的特定相互作用使水相中的TS更稳定,该反应在水中比在甲醇中发生得更快。