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心脏肌联蛋白可伸展I带区域的cDNA序列和外显子剪接模式的物种差异:与被动张力的关系

Species variations in cDNA sequence and exon splicing patterns in the extensible I-band region of cardiac titin: relation to passive tension.

作者信息

Greaser Marion L, Berri Mustapha, Warren Chad M, Mozdziak Paul E

机构信息

University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.

出版信息

J Muscle Res Cell Motil. 2002;23(5-6):473-82. doi: 10.1023/a:1023410523184.

Abstract

Titin is believed to play a major role in passive tension development in cardiac muscle. The cDNA sequence of cardiac titin in the I-band sarcomeric region was determined for several mammalian species. Contiguous sequences of 3749, 12,230, 6602, and 11,850 base pairs have been obtained for the rat N2B, rat N2BA, dog N2B, and dog N2BA isoforms respectively. The length of the PEVK region of the N2B isoform did not correlate with rest tension properties since the only species showing an altered length was the dog that expressed a shorter form. No differences were found between the N2B PEVK lengths in ventricular and atrial muscle. New N2BA splicing pathways in the first tandem Ig region were found in human and dog cardiac muscle. Most of the rat and dog sequences were 85-95% identical with the reported human sequence. However, the N2B unique amino acid sequences of rat and dog were only 51 and 67% identical to human. The rat N2B unique sequence was 526 amino acids in length compared to 572 in human. The difference in length was due to deletion of amino acid segments from six different regions of the N2B unique domain. Patterns of PEVK exon expression were also much different in the dog, human, and rat. Six separate dog N2BA PEVK clones were sequenced, and all had different exon splice combinations yielding PEVK lengths ranging from 703 to 900 amino acids. In contrast a rat N2BA clone had a PEVK length of 525 amino acids, while a human clone had an 908 amino acid PEVK segment. Thus, in addition to the higher proportion of the shorter N2B isoform found in rat compared with dog cardiac muscle observed previously, shorter N2B unique and N2BA PEVK segments may also contribute to the greater passive tension in cardiac muscle from rats.

摘要

肌联蛋白被认为在心肌被动张力的发展中起主要作用。已确定了几种哺乳动物物种心肌肌联蛋白I带肌节区域的cDNA序列。分别获得了大鼠N2B、大鼠N2BA、犬N2B和犬N2BA亚型的3749、12230、6602和11850个碱基对的连续序列。N2B亚型的PEVK区域长度与静息张力特性无关,因为唯一显示长度改变的物种是表达较短形式的犬。在心室肌和心房肌的N2B PEVK长度之间未发现差异。在人和犬的心肌中发现了第一个串联免疫球蛋白区域的新的N2BA剪接途径。大多数大鼠和犬的序列与已报道的人类序列有85 - 95%的同一性。然而,大鼠和犬的N2B独特氨基酸序列与人类的同一性仅为51%和67%。大鼠N2B独特序列长度为526个氨基酸,而人类为572个氨基酸。长度差异是由于N2B独特结构域六个不同区域的氨基酸片段缺失。犬、人和大鼠的PEVK外显子表达模式也有很大差异。对六个不同的犬N2BA PEVK克隆进行了测序,所有克隆都有不同的外显子剪接组合,产生的PEVK长度在703至900个氨基酸之间。相比之下,一个大鼠N2BA克隆的PEVK长度为525个氨基酸,而一个人类克隆有一个908个氨基酸的PEVK片段。因此,除了先前观察到的大鼠心肌中较短的N2B亚型比例高于犬心肌外,较短的N2B独特序列和N2BA PEVK片段也可能导致大鼠心肌更大的被动张力。

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