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细粒棘球绦虫脂肪酸结合蛋白1的晶体结构

The crystal structure of Echinococcus granulosus fatty-acid-binding protein 1.

作者信息

Jakobsson Emma, Alvite Gabriela, Bergfors Terese, Esteves Adriana, Kleywegt Gerard J

机构信息

Department of Cell and Molecular Biology, Uppsala University, Biomedical Centre, Box 596, SE-751 24, Uppsala, Sweden.

出版信息

Biochim Biophys Acta. 2003 Jun 26;1649(1):40-50. doi: 10.1016/s1570-9639(03)00151-1.

Abstract

We describe the 1.6 A crystal structure of the fatty-acid-binding protein EgFABP1 from the parasitic platyhelminth Echinococcus granulosus. E. granulosus causes hydatid disease, which is a major zoonosis. EgFABP1 has been implicated in the acquisition, storage, and transport of lipids, and may be important to the organism since it is incapable of synthesising most of its lipids de novo. Moreover, EgFABP1 is a promising candidate for a vaccine against hydatid disease. The crystal structure reveals that EgFABP1 has the expected 10-stranded beta-barrel fold typical of the family of intracellular lipid-binding proteins, and that it is structurally most similar to P2 myelin protein. We describe the comparison of the crystal structure of EgFABP1 with these proteins and with an older homology model for EgFABP1. The electron density reveals the presence of a bound ligand inside the cavity, which we have interpreted as palmitic acid. The carboxylate group of the fatty acid interacts with the protein's P2 motif, consisting of a conserved triad R em leader R-x-Y. The hydrophobic tail of the ligand assumes a fairly flat, U-shaped conformation and has relatively few interactions with the protein.We discuss some of the structural implications of the crystal structure of EgFABP1 for related platyhelminthic FABPs.

摘要

我们描述了来自寄生扁形虫细粒棘球绦虫的脂肪酸结合蛋白EgFABP1的1.6埃晶体结构。细粒棘球绦虫会引发包虫病,这是一种主要的人畜共患病。EgFABP1与脂质的获取、储存和运输有关,并且由于该生物体无法从头合成其大部分脂质,因此它可能对该生物体很重要。此外,EgFABP1是抗包虫病疫苗的一个有前景的候选物。晶体结构表明,EgFABP1具有细胞内脂质结合蛋白家族典型的预期10股β桶折叠结构,并且在结构上与P2髓鞘蛋白最为相似。我们描述了EgFABP1的晶体结构与这些蛋白质以及EgFABP1的一个较早的同源模型的比较。电子密度显示在腔内存在一个结合配体,我们将其解释为棕榈酸。脂肪酸的羧基与蛋白质的P2基序相互作用,该基序由保守的三联体R em leader R-x-Y组成。配体的疏水尾部呈现出相当扁平的U形构象,并且与蛋白质的相互作用相对较少。我们讨论了EgFABP1晶体结构对相关扁形虫FABP的一些结构影响。

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