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研究脂肪酸结合蛋白超家族的免疫学前景及治疗靶点前景

Investigating the Fatty Acid Binding Protein Superfamily for Their Immunological Outlook and Prospect for Therapeutic Targets.

作者信息

Rawat Suraj S, Singh Gagandeep, Prasad Amit

机构信息

School of Biosciences and Bioengineering, Indian Institute of Technology Mandi, Mandi, Himachal Pradesh 175005, India.

Dayanad Medical College and Hospital, Ludhiana, Punjab 141001,India.

出版信息

ACS Omega. 2024 May 15;9(21):22557-22572. doi: 10.1021/acsomega.3c09253. eCollection 2024 May 28.

Abstract

, like other helminthic parasites, lacks key components of cellular machinery required for endogenous lipid biosynthesis. This deficiency compels the parasite to obtain all of its lipid requirements from its host. The passage of lipids across the cell membrane is tightly regulated. To facilitate effective lipid transport, the cestode parasite utilizes certain lipid binding proteins called FABPs. These FABPs bind with the lipid ligands and allow the transport of lipids across the membranes and into the cytosol. Here, by integrating a computational with homology protein prediction tools, we had identified five FABPs in the proteome. We confirmed their presence by RNA expression analysis of respective genes from the parasite's cysticerci transcript. During the molecular modeling and MD simulation studies, two of them, TsM_000544100 and TsM_001185100, were most stable. Furthermore, they had a robust interaction with the IgG1 molecule, as evidenced by MD simulation. In addition, by employing screening, we had identified potential ligand interacting residues that are present on the probable druggable site. In combination with cysticidal assays, enalaprilat dihydrate showed efficacy against cysticerci, which suggests that FABPs play a significant role in the cysticercus life cycle. Together, we provided a detailed distribution of all FABPs expressed by cysticerci and the critical role of TsM_001185100 in cysticercus viability.

摘要

与其他蠕虫寄生虫一样,缺乏内源性脂质生物合成所需的细胞机制关键成分。这种缺陷迫使寄生虫从宿主获取其所有脂质需求。脂质跨细胞膜的转运受到严格调控。为促进有效的脂质运输,绦虫寄生虫利用某些称为脂肪酸结合蛋白(FABPs)的脂质结合蛋白。这些FABPs与脂质配体结合,使脂质能够跨膜运输到细胞质中。在此,通过整合计算和同源蛋白预测工具,我们在蛋白质组中鉴定出了五种FABPs。我们通过对寄生虫囊尾蚴转录本中各个基因的RNA表达分析证实了它们的存在。在分子建模和分子动力学模拟研究中,其中两种,即TsM_000544100和TsM_001185100,最为稳定。此外,分子动力学模拟表明它们与IgG1分子有强烈的相互作用。此外,通过进行筛选,我们确定了可能存在于可成药位点上的潜在配体相互作用残基。结合杀囊尾蚴试验,二水合依那普利拉对囊尾蚴显示出疗效,这表明FABPs在囊尾蚴的生命周期中起重要作用。我们共同提供了囊尾蚴表达的所有FABPs的详细分布以及TsM_001185100在囊尾蚴生存能力中的关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb65/11137695/b2e8a76d8555/ao3c09253_0001.jpg

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