Verdon Grégory, Albers Sonja V, Dijkstra Bauke W, Driessen Arnold J M, Thunnissen Andy Mark W H
Laboratory of Biophysical Chemistry, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
J Mol Biol. 2003 Jul 4;330(2):343-58. doi: 10.1016/s0022-2836(03)00575-8.
The ABC-ATPase GlcV energizes a binding protein-dependent ABC transporter that mediates glucose uptake in Sulfolobus solfataricus. Here, we report high-resolution crystal structures of GlcV in different states along its catalytic cycle: distinct monomeric nucleotide-free states and monomeric complexes with ADP-Mg(2+) as a product-bound state, and with AMPPNP-Mg(2+) as an ATP-like bound state. The structure of GlcV consists of a typical ABC-ATPase domain, comprising two subdomains, connected by a linker region to a C-terminal domain of unknown function. Comparisons of the nucleotide-free and nucleotide-bound structures of GlcV reveal re-orientations of the ABCalpha subdomain and the C-terminal domain relative to the ABCalpha/beta subdomain, and switch-like rearrangements in the P-loop and Q-loop regions. Additionally, large conformational differences are observed between the GlcV structures and those of other ABC-ATPases, further emphasizing the inherent flexibility of these proteins. Notably, a comparison of the monomeric AMPPNP-Mg(2+)-bound GlcV structure with that of the dimeric ATP-Na(+)-bound LolD-E171Q mutant reveals a +/-20 degrees rigid body re-orientation of the ABCalpha subdomain relative to the ABCalpha/beta subdomain, accompanied by a local conformational difference in the Q-loop. We propose that these differences represent conformational changes that may have a role in the mechanism of energy-transduction and/or allosteric control of the ABC-ATPase activity in bacterial importers.
ABC 转运蛋白 GlcV 为一种依赖结合蛋白的 ABC 转运体提供能量,该转运体介导嗜热栖热菌中的葡萄糖摄取。在此,我们报告了 GlcV 在其催化循环不同状态下的高分辨率晶体结构:不同的无核苷酸单体状态以及与 ADP-Mg(2+) 形成的产物结合态单体复合物,还有与 AMPPNP-Mg(2+) 形成的类似 ATP 结合态单体复合物。GlcV 的结构由一个典型的 ABC 转运蛋白 ATP 酶结构域组成,该结构域包含两个亚结构域,通过一个连接区域与一个功能未知的 C 末端结构域相连。GlcV 的无核苷酸结构与核苷酸结合结构的比较揭示了 ABCα 亚结构域和 C 末端结构域相对于 ABCα/β 亚结构域的重新定向,以及 P 环和 Q 环区域的开关式重排。此外,在 GlcV 结构与其他 ABC 转运蛋白 ATP 酶结构之间观察到了较大的构象差异,进一步强调了这些蛋白质固有的灵活性。值得注意的是,将结合 AMPPNP-Mg(2+) 的单体 GlcV 结构与结合 ATP-Na(+) 的二聚体 LolD-E171Q 突变体结构进行比较,发现 ABCα 亚结构域相对于 ABCα/β 亚结构域有 +/ -20 度的刚体重新定向,同时 Q 环存在局部构象差异。我们认为这些差异代表了构象变化,可能在细菌输入蛋白中 ABC 转运蛋白 ATP 酶活性的能量转导和/或变构控制机制中发挥作用。