Xu Yi-Hua, Pitot Henry C
Department of Oncology, McArdle Laboratory for Cancer Research, University of Wisconsin, 1400 University Avenue, Madison, WI 53706, USA.
Comput Methods Programs Biomed. 2003 Sep;72(1):1-20. doi: 10.1016/s0169-2607(02)00115-3.
Single enzyme-altered hepatocytes; altered hepatic foci (AHF); and nodular lesions have been implicated, respectively in the processes of initiation, promotion, and progression in rodent hepatocarcinogenesis. Qualitative and quantitative analyses of such lesions have been utilized both to identify and to determine the potency of initiating, promoting, and progressor agents in rodent liver. Of a number of possible parameters determined in the study of such lesions, estimation of the number of foci or nodules in the liver is very important. The method of Saltykov has been used for estimating the number of AHF in rat liver. However, in practice, the Saltykov calculation has at least two weak points: (a) the size class range is limited to 12, which in many instances is too narrow to cover the range of AHF data obtained; and (b) under some conditions, the Saltykov equation generates negative values in several size classes, an obvious impossibility in the real world. In order to overcome these limitations in the Saltykov calculations, a study of the particle size distribution in a wide-range, polydispersed sphere system was performed. A stereologic method, termed the 25F Association method, was developed from this study. This method offers 25 association factors that are derived from the frequency of different-sized transections obtained from transecting a spherical particle, thus expanding the size class range to be analyzed up to 25, which is sufficiently wide to encompass all rat AHF found in most cases. This method exhibits greater flexibility, which allows adjustments to be made within the calculation process when NA((k,k)), the net number of transections from the same size spheres, was found to be a negative value, which is not possible in real situations. The reliability of the 25F Association method was tested thoroughly by computer simulation in both monodispersed and polydispersed sphere systems. The test results were compared with the original Saltykov method. We found that the 25F Association method yielded a better estimate of the total number of spheres in the three-dimensional tissue sample as well as the detailed size distribution information. Although the 25F Association method was derived from the study of a polydispersed sphere system, it can be used for continuous size distribution sphere systems. Application of this method to the estimation of parameters of preneoplastic foci in rodent liver is presented as an example of its utility. An application software program, 3D_estimation.exe, which uses the 25F Association method to estimate the number of AHF in rodent liver, has been developed and is now available at the website of this laboratory.
单一酶改变的肝细胞、肝病灶改变(AHF)和结节性病变分别与啮齿动物肝癌发生过程中的启动、促进和进展相关。对这些病变进行定性和定量分析,已用于识别和确定啮齿动物肝脏中启动剂、促进剂和进展剂的效力。在这类病变研究中确定的许多可能参数中,估计肝脏中病灶或结节的数量非常重要。Saltykov方法已用于估计大鼠肝脏中AHF的数量。然而,在实际应用中,Saltykov计算至少有两个弱点:(a)大小类别范围限制为12,在许多情况下,这个范围太窄,无法涵盖所获得的AHF数据范围;(b)在某些条件下,Saltykov方程在几个大小类别中会产生负值,这在现实世界中显然是不可能的。为了克服Saltykov计算中的这些限制,对宽范围、多分散球体系统中的颗粒大小分布进行了研究。从这项研究中开发出一种立体学方法,称为25F关联法。该方法提供了25个关联因子,这些因子来自于对球形颗粒进行横切所获得的不同大小横切面的频率,从而将待分析的大小类别范围扩展到25,这个范围足够宽,能够涵盖大多数情况下在大鼠中发现的所有AHF。该方法具有更大的灵活性,当发现来自相同大小球体的横切净数NA((k,k))为负值(这在实际情况中是不可能的)时,允许在计算过程中进行调整。通过计算机模拟在单分散和多分散球体系统中对25F关联法的可靠性进行了全面测试。将测试结果与原始的Saltykov方法进行了比较。我们发现,25F关联法能更好地估计三维组织样本中球体的总数以及详细的大小分布信息。尽管25F关联法源自对多分散球体系统的研究,但它可用于连续大小分布的球体系统。以其在啮齿动物肝脏癌前病灶参数估计中的应用为例,展示了该方法的实用性。已开发出一个应用软件程序3D_estimation.exe,它使用25F关联法来估计啮齿动物肝脏中AHF的数量,该程序现在可在本实验室网站获取。