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醇类、醚类、碳水化合物及相关化合物。I. 简单化合物的MM4力场

Alcohols, ethers, carbohydrates, and related compounds. I. The MM4 force field for simple compounds.

作者信息

Allinger Norman L, Chen Kuo-Hsiang, Lii Jenn-Huei, Durkin Kathleen A

机构信息

Computational Center for Molecular Structure and Design, Department of Chemistry, Chemistry Annex, University of Georgia, Athens, Georgia 30602-2526, USA.

出版信息

J Comput Chem. 2003 Sep;24(12):1447-72. doi: 10.1002/jcc.10268.

Abstract

Simple alcohols and ethers have been studied with the MM4 force field. The structures of 13 molecules have been well fit using the MM4 force field. Moments of inertia have been fit with rms percentage errors as indicated: 18 moments for ethers, 0.28%; 21 moments for alcohols, 0.22%. Rotational barriers and conformational equilibria have also been examined, and the experimental and ab initio results are reproduced substantially better with MM4 than they were with MM3. Much of the improvement comes from the use of additional interaction terms in the force constant matrix, of which the torsion-bend and torsion-torsion are particularly important. Induced dipoles are included in the calculation, and dipole moments are reasonably well fit. It has been possible for the first time to fit conformational energetic data for both open chain and cyclic alcohols (e.g., propanol and cyclohexanol) with the same parameter set. For vibrational spectra, over a total of 82 frequencies, the rms error is 27 cm(-1), as opposed to 38 cm(-1) with MM3. Both the alpha and beta bond shortening resulting from the presence of the electronegative oxygen atom in the molecule are well reproduced. The electronegativity of the oxygen is sufficient that one must also include not only the alpha and beta electronegativity effects on bond lengths, but also on angle distortions, if structures are to be well reproduced. The heats of formation of 32 alcohols and ethers were fit overall to within experimental error (weighted standard deviation error 0.26 kcal/mol).

摘要

简单的醇类和醚类已通过MM4力场进行了研究。利用MM4力场对13种分子的结构进行了很好的拟合。转动惯量的拟合均方根百分比误差如下:醚类18个转动惯量,0.28%;醇类21个转动惯量,0.22%。还研究了旋转势垒和构象平衡,与MM3相比,MM4对实验结果和从头算结果的重现性有了显著提高。大部分改进来自于在力常数矩阵中使用了额外的相互作用项,其中扭转-弯曲和扭转-扭转相互作用项尤为重要。计算中包含了诱导偶极矩,偶极矩拟合得相当好。首次有可能用同一参数集对开链醇和环醇(如丙醇和环己醇)的构象能量数据进行拟合。对于振动光谱,在总共82个频率上,均方根误差为27cm-1,而MM3为38cm-1。分子中电负性氧原子的存在所导致的α键和β键缩短都得到了很好的重现。氧的电负性足够大,以至于如果要很好地重现结构,不仅必须考虑α和β电负性对键长的影响,还必须考虑其对角度畸变的影响。32种醇类和醚类的生成热总体上拟合到了实验误差范围内(加权标准偏差误差为0.26kcal/mol)。

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