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希瓦氏菌MR-1中铬酸盐还原的建模:一种新型双酶动力学模型的建立

Modeling chromate reduction in Shewanella oneidensis MR-1: development of a novel dual-enzyme kinetic model.

作者信息

Viamajala Sridhar, Peyton Brent M, Petersen James N

机构信息

Department of Chemical Engineering, WSU/NSF IGERT Center for Multiphase Environmental Research, Washington State University, P.O. Box 642719, Pullman, WA 99164-2719, USA.

出版信息

Biotechnol Bioeng. 2003 Sep 30;83(7):790-7. doi: 10.1002/bit.10724.

Abstract

Chromate (Cr(VI)) reduction tests were performed with nitrate- and fumarate-grown stationary phase cultures of Shewanella oneidensis MR-1 (henceforth referred to as MR-1) and disappearance of Cr(VI) was monitored over time. A rapid initial decrease in Cr(VI) concentration was observed, which was followed by a slower, steady decrease. These observations appear to be consistent with our previous results indicating that Cr(VI) reduction in MR-1 involves at least two mechanisms (Viamajala et al., 2002b). Modeling of metal reduction kinetics is often based on single-enzyme Michaelis-Menten equations. However, these models are often developed using initial rates and do not always match actual reduction profiles. Based on the hypothesis that multiple Cr(VI) reduction mechanisms exist in MR-1, a model was developed to describe the kinetics of Cr(VI) reduction by two parallel mechanisms: (1) a rapid Cr(VI) reduction mechanism that was deactivated (or depleted) quickly, and (2) a slower mechanism that had a constant activity and was sustainable for a longer duration. Kinetic parameters were estimated by fitting experimental data, and model fits were found to correspond very closely to quantitative observations of Cr(VI) reduction by MR-1.

摘要

利用硝酸盐和富马酸培养的希瓦氏菌MR-1(以下简称MR-1)的稳定期培养物进行了铬酸盐(Cr(VI))还原试验,并随时间监测Cr(VI)的消失情况。观察到Cr(VI)浓度最初迅速下降,随后缓慢、持续下降。这些观察结果似乎与我们之前的结果一致,表明MR-1中Cr(VI)的还原至少涉及两种机制(Viamajala等人,2002b)。金属还原动力学建模通常基于单酶米氏方程。然而,这些模型通常是使用初始速率开发的,并不总是与实际还原曲线相匹配。基于MR-1中存在多种Cr(VI)还原机制的假设,开发了一个模型来描述通过两种平行机制进行的Cr(VI)还原动力学:(1)一种快速的Cr(VI)还原机制,该机制迅速失活(或耗尽);(2)一种较慢的机制,其具有恒定活性且可持续更长时间。通过拟合实验数据估计动力学参数,发现模型拟合与MR-1对Cr(VI)还原的定量观察结果非常吻合。

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