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自我互补嵌合寡核苷酸r(CG)n d(CG)3-n(n = 0, 1, 2, 3)的双螺旋形成

Double-helix formation of self-complementary chimeric oligonucleotides r(CG)nd(CG)3-n (n = 0, 1, 2, 3).

作者信息

Sugimoto N, Matsumura A, Katoh M, Sasaki M

机构信息

Department of Chemistry, Faculty of Science, Konan University, Kobe, Japan.

出版信息

Nucleic Acids Symp Ser. 1992(27):139-40.

PMID:1289794
Abstract

Double-helix formations of self-complementary chimeric hexanucleotides, r(CGCGCG), r(CGCG)d(CG), r(CG)d(CGCG), and d(CGCGCG), have been studied spectrophotometrically an thermodynamically in 1 mol dm-3 NaCl buffer. CD (circular dichroism) spectra showed that r(CGCGCG), r(CGCG)d(CG), and r(CG)d(CGCG) formed A-type double helix, while d(CGCGCG) formed B-type double helix. The stabilization energies of these helices at 37 degrees C obtained from UV melting analyses were 9.2 kcal mol-1 for r(CGCGCG), 8.2 kcal mol-1 for r(CGCG)d(CG), 6.8 kcal mol-1 for r(CG)d(CGCG), and 8.5 kcal mol-1 for d(CGCGCG), respectively.

摘要

在1 mol dm-3 NaCl缓冲液中,通过分光光度法和热力学方法研究了自我互补嵌合六核苷酸r(CGCGCG)、r(CGCG)d(CG)、r(CG)d(CGCG)和d(CGCGCG)的双螺旋结构。圆二色光谱(CD)表明,r(CGCGCG)、r(CGCG)d(CG)和r(CG)d(CGCG)形成A型双螺旋,而d(CGCGCG)形成B型双螺旋。通过紫外熔解分析获得的这些螺旋在37℃时的稳定能分别为:r(CGCGCG)为9.2 kcal mol-1,r(CGCG)d(CG)为8.2 kcal mol-1,r(CG)d(CGCG)为6.8 kcal mol-1,d(CGCGCG)为8.5 kcal mol-1。

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