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将4-丙炔基-吡咯-2-甲醛与9-甲基-咪唑并[(4,5)-b]吡啶之间的非天然碱基对酶促掺入核酸中。

Enzymatic incorporation of an unnatural base pair between 4-propynyl-pyrrole-2-carbaldehyde and 9-methyl-imidazo [(4,5)-b]pyridine into nucleic acids.

作者信息

Mitsui Tsuneo, Kimoto Michiko, Harada Yoko, Sato Akira, Kitamura Aya, To Taiko, Hirao Ichiro, Yokoyama Shigeyuki

机构信息

Research Center for Advanced Science and Technology, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan.

出版信息

Nucleic Acids Res Suppl. 2002(2):219-20. doi: 10.1093/nass/2.1.219.

DOI:10.1093/nass/2.1.219
PMID:12903184
Abstract

A hydrophobic unnatural nucleoside of 4-propynylpyrrole-2-carbaldehyde (designated as Pa') was synthesized to improve its affinity with a pairing partner, 9-methyl-imidazo[(4,5)-b]pyridine (Q), in enzymatic incorporation. In single-nucleotide insertion experiments using the Klenow fragment, the substrate of Pa' (dPa'TP) was efficiently incorporated opposite Q in the template strand, as compared to the incorporation of pyrrole-2-carbaldehyde (dPaTP), which was previously developed.

摘要

合成了一种4-丙炔基吡咯-2-甲醛的疏水非天然核苷(命名为Pa'),以提高其在酶促掺入中与配对伙伴9-甲基咪唑并[(4,5)-b]吡啶(Q)的亲和力。在使用Klenow片段的单核苷酸插入实验中,与先前开发的吡咯-2-甲醛(dPaTP)的掺入相比,Pa'的底物(dPa'TP)能有效地掺入模板链中与Q相对的位置。

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引用本文的文献

1
Optimization of unnatural base pair packing for polymerase recognition.用于聚合酶识别的非天然碱基对堆积的优化
J Am Chem Soc. 2006 May 17;128(19):6369-75. doi: 10.1021/ja057575m.
2
Substituent effects on the pairing and polymerase recognition of simple unnatural base pairs.取代基对简单非天然碱基对配对及聚合酶识别的影响。
Nucleic Acids Res. 2006 Apr 14;34(7):2037-45. doi: 10.1093/nar/gkl049. Print 2006.