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Interaction of peptides derived from RecA with single-stranded oligonucleotides containing 5-formyl-2'-deoxyuridine.

作者信息

Sugiyama T, Kittaka A, Takayama H, Tomioka M, Ida Y, Kuroda R

机构信息

Department of Life Sciences, Graduate School of Arts and Sciences, University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902, Japan.

出版信息

Nucleic Acids Symp Ser. 2000(44):41-2. doi: 10.1093/nass/44.1.41.

DOI:10.1093/nass/44.1.41
PMID:12903258
Abstract

We report the first example of chemical cross-linking of 5-formyl-2'-deoxyuridine containing oligonucleotides with oligopeptides through a Schiff base formation. Twenty amino acid residue peptides investigated here were derived from the DNA binding site of RecA protein. We have demonstrated that the lysine residue placed at the 6th or 8th position from the N-terminus of the peptide directly contacts with DNA.

摘要

相似文献

1
Interaction of peptides derived from RecA with single-stranded oligonucleotides containing 5-formyl-2'-deoxyuridine.
Nucleic Acids Symp Ser. 2000(44):41-2. doi: 10.1093/nass/44.1.41.
2
Chemical cross-linking of peptides derived from RecA with single-stranded oligonucleotides containing 5-formyl-2'-deoxyuridine.源自RecA的肽与含有5-甲酰基-2'-脱氧尿苷的单链寡核苷酸的化学交联。
Nucleosides Nucleotides Nucleic Acids. 2001 Apr-Jul;20(4-7):1079-83. doi: 10.1081/NCN-100002494.
3
Evidence for a Schiff base formation of peptides derived from RecA with single-stranded oligonucleotides containing 5-formyl-2'-deoxyuridine.
Nucleic Acids Res Suppl. 2001(1):175-6. doi: 10.1093/nass/1.1.175.
4
Aggregation of RecA-derived peptides on single-stranded oligonucleotides triggered by schiff base-mediated crosslinking.
Bioorg Med Chem Lett. 2003 Sep 1;13(17):2847-51. doi: 10.1016/s0960-894x(03)00593-6.
5
Interaction of oligonucleotides with a single stranded DNA binding site of RecA protein.寡核苷酸与RecA蛋白单链DNA结合位点的相互作用。
Nucleic Acids Symp Ser. 1995(34):61-2.
6
Periodicity in recA protein-DNA complexes.
FEBS Lett. 1997 May 5;407(3):325-8. doi: 10.1016/s0014-5793(97)00367-0.
7
DNA recognition of a 24-mer peptide derived from RecA protein.源自RecA蛋白的24肽的DNA识别
Biopolymers. 2000;55(6):416-24. doi: 10.1002/1097-0282(2000)55:6<416::AID-BIP1017>3.0.CO;2-P.
8
Homologous DNA pairing promoted by a 20-amino acid peptide derived from RecA.由源自RecA的一种20个氨基酸的肽所促进的同源DNA配对。
Science. 1996 May 10;272(5263):868-72. doi: 10.1126/science.272.5263.868.
9
Photocross-links between single-stranded DNA and Escherichia coli RecA protein map to loops L1 (amino acid residues 157-164) and L2 (amino acid residues 195-209).单链DNA与大肠杆菌RecA蛋白之间的光交联定位在环L1(氨基酸残基157 - 164)和环L2(氨基酸残基195 - 209)。
J Biol Chem. 1995 Dec 15;270(50):30230-3. doi: 10.1074/jbc.270.50.30230.
10
Binding, annealing and strand exchange between oligonucleotides in different sites of the RecA protein filament.RecA蛋白丝不同位点上寡核苷酸之间的结合、退火及链交换。
FEBS Lett. 2000 May 4;473(1):53-7. doi: 10.1016/s0014-5793(00)01497-6.

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