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嗜冷栖热袍菌冷活性二氢叶酸还原酶:在低温下催化效率的优化是否存在天然限制?

Moritella cold-active dihydrofolate reductase: are there natural limits to optimization of catalytic efficiency at low temperature?

作者信息

Xu Ying, Feller Georges, Gerday Charles, Glansdorff Nicolas

机构信息

J. M. Wiame Research Institute, Microbiology, Free University of Brussels (VUB), B-1070 Brussels, Belgium.

出版信息

J Bacteriol. 2003 Sep;185(18):5519-26. doi: 10.1128/JB.185.18.5519-5526.2003.

Abstract

Adapting metabolic enzymes of microorganisms to low temperature environments may require a difficult compromise between velocity and affinity. We have investigated catalytic efficiency in a key metabolic enzyme (dihydrofolate reductase) of Moritella profunda sp. nov., a strictly psychrophilic bacterium with a maximal growth rate at 2 degrees C or less. The enzyme is monomeric (Mr=18,291), 55% identical to its Escherichia coli counterpart, and displays Tm and denaturation enthalpy changes much lower than E. coli and Thermotoga maritima homologues. Its stability curve indicates a maximum stability above the temperature range of the organism, and predicts cold denaturation below 0 degrees C. At mesophilic temperatures the apparent Km value for dihydrofolate is 50- to 80-fold higher than for E. coli, Lactobacillus casei, and T. maritima dihydrofolate reductases, whereas the apparent Km value for NADPH, though higher, remains in the same order of magnitude. At 5 degrees C these values are not significantly modified. The enzyme is also much less sensitive than its E. coli counterpart to the inhibitors methotrexate and trimethoprim. The catalytic efficiency (kcat/Km) with respect to dihydrofolate is thus much lower than in the other three bacteria. The higher affinity for NADPH could have been maintained by selection since NADPH assists the release of the product tetrahydrofolate. Dihydrofolate reductase adaptation to low temperature thus appears to have entailed a pronounced trade-off between affinity and catalytic velocity. The kinetic features of this psychrophilic protein suggest that enzyme adaptation to low temperature may be constrained by natural limits to optimization of catalytic efficiency.

摘要

使微生物的代谢酶适应低温环境可能需要在速度和亲和力之间做出艰难的权衡。我们研究了深海莫里特氏菌(Moritella profunda sp. nov.)这一严格嗜冷菌(在2℃或更低温度下具有最大生长速率)的关键代谢酶(二氢叶酸还原酶)的催化效率。该酶为单体(Mr = 18,291),与大肠杆菌的对应酶有55%的同源性,其解链温度(Tm)和变性焓变远低于大肠杆菌和海栖热袍菌(Thermotoga maritima)的同源物。其稳定性曲线表明在该生物体的温度范围之上具有最大稳定性,并预测在0℃以下会发生冷变性。在中温温度下,二氢叶酸的表观Km值比大肠杆菌、干酪乳杆菌(Lactobacillus casei)和海栖热袍菌的二氢叶酸还原酶高50至80倍,而烟酰胺腺嘌呤二核苷酸磷酸(NADPH)的表观Km值虽然较高,但仍处于相同数量级。在5℃时,这些值没有明显改变。该酶对抑制剂甲氨蝶呤和甲氧苄啶的敏感性也远低于其大肠杆菌对应酶。因此,相对于二氢叶酸的催化效率(kcat/Km)远低于其他三种细菌。由于NADPH有助于四氢叶酸产物的释放,对NADPH较高的亲和力可能通过选择得以维持。因此,二氢叶酸还原酶对低温的适应似乎在亲和力和催化速度之间进行了明显的权衡。这种嗜冷蛋白的动力学特征表明,酶对低温的适应可能受到催化效率优化的自然限制。

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