• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

模块化聚酮合酶中对接结构域的结构。

The structure of docking domains in modular polyketide synthases.

作者信息

Broadhurst R William, Nietlispach Daniel, Wheatcroft Michael P, Leadlay Peter F, Weissman Kira J

机构信息

Department of Biochemistry, University of Cambridge, 80 Tennis Court Road, CB2 1GA, Cambridge, United Kingdom.

出版信息

Chem Biol. 2003 Aug;10(8):723-31. doi: 10.1016/s1074-5521(03)00156-x.

DOI:10.1016/s1074-5521(03)00156-x
PMID:12954331
Abstract

Polyketides from actinomycete bacteria provide the basis for many valuable medicines, so engineering genes for their biosynthesis to produce variant molecules holds promise for drug discovery. The modular polyketide synthases are particularly amenable to this approach, because each cycle of chain extension is catalyzed by a different module of enzymes, and the modules are arranged within giant multienzyme subunits in the order in which they act. Protein-protein interactions between terminal docking domains of successive multienzymes promote their correct positioning within the assembly line, but because the overall complex is not stable in vitro, the key interactions have not been identified. We present here the NMR solution structure of a 120 residue polypeptide representing a typical pair of such domains, fused at their respective C and N termini: it adopts a stable dimeric structure which reveals the detailed role of these (predominantly helical) domains in docking and dimerization by modular polyketide synthases.

摘要

来自放线菌的聚酮化合物为许多有价值的药物提供了基础,因此对其生物合成基因进行工程改造以产生变体分子有望用于药物发现。模块化聚酮合酶尤其适合这种方法,因为每个链延伸循环由不同的酶模块催化,并且这些模块按照它们作用的顺序排列在巨大的多酶亚基中。连续多酶的末端对接结构域之间的蛋白质 - 蛋白质相互作用促进它们在装配线中的正确定位,但由于整个复合物在体外不稳定,关键相互作用尚未确定。我们在此展示了一个120个残基多肽的NMR溶液结构,该多肽代表一对典型的此类结构域,在它们各自的C端和N端融合:它采用稳定的二聚体结构,揭示了这些(主要是螺旋状)结构域在模块化聚酮合酶的对接和二聚化中的详细作用。

相似文献

1
The structure of docking domains in modular polyketide synthases.模块化聚酮合酶中对接结构域的结构。
Chem Biol. 2003 Aug;10(8):723-31. doi: 10.1016/s1074-5521(03)00156-x.
2
Evidence for a double-helical structure for modular polyketide synthases.模块化聚酮合酶双螺旋结构的证据。
Nat Struct Biol. 1996 Feb;3(2):188-92. doi: 10.1038/nsb0296-188.
3
Computational approach for prediction of domain organization and substrate specificity of modular polyketide synthases.模块化聚酮合酶结构域组织和底物特异性预测的计算方法
J Mol Biol. 2003 Apr 25;328(2):335-63. doi: 10.1016/s0022-2836(03)00232-8.
4
Chain initiation on the soraphen-producing modular polyketide synthase from Sorangium cellulosum.来自纤维堆囊菌的索拉芬产生型模块化聚酮合酶的链起始。
Chem Biol. 2001 Dec;8(12):1197-208. doi: 10.1016/s1074-5521(01)00087-4.
5
Knowledge-based design of bimodular and trimodular polyketide synthases based on domain and module swaps: a route to simple statin analogues.基于结构域和模块交换的双模块和三模块聚酮合酶的知识驱动设计:通往简单他汀类似物的途径。
Chem Biol. 1999 Oct;6(10):731-41. doi: 10.1016/s1074-5521(00)80020-4.
6
SEARCHPKS: A program for detection and analysis of polyketide synthase domains.SEARCHPKS:一个用于检测和分析聚酮合酶结构域的程序。
Nucleic Acids Res. 2003 Jul 1;31(13):3654-8. doi: 10.1093/nar/gkg607.
7
A model of structure and catalysis for ketoreductase domains in modular polyketide synthases.模块化聚酮合酶中酮还原酶结构域的结构与催化模型。
Biochemistry. 2003 Jan 14;42(1):72-9. doi: 10.1021/bi0268706.
8
Multienzyme docking in hybrid megasynthetases.杂合巨型合成酶中的多酶对接
Nat Chem Biol. 2008 Jan;4(1):75-81. doi: 10.1038/nchembio.2007.61. Epub 2007 Dec 9.
9
The structure of a ketoreductase determines the organization of the beta-carbon processing enzymes of modular polyketide synthases.酮还原酶的结构决定了模块化聚酮合酶的β-碳加工酶的组织方式。
Structure. 2006 Apr;14(4):737-48. doi: 10.1016/j.str.2006.01.009. Epub 2006 Mar 23.
10
Mechanisms of molecular recognition in the pikromycin polyketide synthase.匹克霉素聚酮合酶中的分子识别机制。
Chem Biol. 2000 Dec;7(12):907-18. doi: 10.1016/s1074-5521(00)00039-9.

引用本文的文献

1
Docking domains from modular polyketide synthases and their use in engineering.模块化聚酮合酶的对接结构域及其在工程中的应用。
Nat Commun. 2025 Jul 22;16(1):6690. doi: 10.1038/s41467-025-61435-4.
2
Reply to: Docking domains from modular polyketide synthases and their use in engineering.回复:来自模块化聚酮合酶的对接结构域及其在工程中的应用。
Nat Commun. 2025 Jul 22;16(1):6689. doi: 10.1038/s41467-025-61436-3.
3
Molecular Basis for Asynchronous Chain Elongation During Rifamycin Antibiotic Biosynthesis.利福霉素抗生素生物合成过程中异步链延伸的分子基础
bioRxiv. 2025 Jul 6:2025.07.05.663307. doi: 10.1101/2025.07.05.663307.
4
Interpretable adenylation domain specificity prediction using protein language models.使用蛋白质语言模型进行可解释的腺苷化结构域特异性预测。
bioRxiv. 2025 Jan 18:2025.01.13.632878. doi: 10.1101/2025.01.13.632878.
5
Refactoring the pikromycin synthase for the modular biosynthesis of macrolide antibiotics in E. coli.重构聚酮霉素合酶用于在大肠杆菌中进行大环内酯类抗生素的模块化生物合成。
Res Sq. 2025 Jan 8:rs.3.rs-5640596. doi: 10.21203/rs.3.rs-5640596/v1.
6
Structural basis for intermodular communication in assembly-line polyketide biosynthesis.聚酮化合物流水线式生物合成中模块间通讯的结构基础
Nat Chem Biol. 2025 Jun;21(6):876-882. doi: 10.1038/s41589-024-01709-y. Epub 2024 Aug 23.
7
Mutagenesis Supports AlphaFold Prediction of How Modular Polyketide Synthase Acyl Carrier Proteins Dock With Downstream Ketosynthases.诱变支持 AlphaFold 预测模块化聚酮合酶酰基载体蛋白如何与下游酮合酶对接。
Proteins. 2024 Dec;92(12):1375-1384. doi: 10.1002/prot.26733. Epub 2024 Jul 30.
8
Insights into docking in megasynthases from the investigation of the toblerol -AT polyketide synthase: many α-helical means to an end.通过对托百乐 -AT 聚酮合酶的研究洞察大型合成酶中的对接:多种 α 螺旋通向一个目标。
RSC Chem Biol. 2024 May 16;5(7):669-683. doi: 10.1039/d4cb00075g. eCollection 2024 Jul 3.
9
Discovering type I cis-AT polyketides through computational mass spectrometry and genome mining with Seq2PKS.通过计算质谱和基因组挖掘 Seq2PKS 发现 I 型顺式-AT 聚酮化合物。
Nat Commun. 2024 Jun 25;15(1):5356. doi: 10.1038/s41467-024-49587-1.
10
Structure and Mechanisms of Assembly-Line Polyketide Synthases.装配线聚酮合酶的结构与机制。
Annu Rev Biochem. 2024 Aug;93(1):471-498. doi: 10.1146/annurev-biochem-080923-043654. Epub 2024 Jul 2.