Kiel Michael C, Raj V Samuel, Kaji Hideko, Kaji Akira
Department of Microbiology, School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
J Biol Chem. 2003 Nov 28;278(48):48041-50. doi: 10.1074/jbc.M304834200. Epub 2003 Sep 5.
Elongation factor G (EF-G) and ribosome recycling factor (RRF) disassemble post-termination complexes of ribosome, mRNA, and tRNA. RRF forms stable complexes with 70 S ribosomes and 50 S ribosomal subunits. Here, we show that EF-G releases RRF from 70 S ribosomal and model post-termination complexes but not from 50 S ribosomal subunit complexes. The release of bound RRF by EF-G is stimulated by GTP analogues. The EF-G-dependent release occurs in the presence of fusidic acid and viomycin. However, thiostrepton inhibits the release. RRF was shown to bind to EF-G-ribosome complexes in the presence of GTP with much weaker affinity, suggesting that EF-G may move RRF to this position during the release of RRF. On the other hand, RRF did not bind to EF-G-ribosome complexes with fusidic acid, suggesting that EF-G stabilized by fusidic acid does not represent the natural post-termination complex. In contrast, the complexes of ribosome, EF-G and thiostrepton could bind RRF, although with lower affinity. These results suggest that thiostrepton traps an intermediate complex having RRF on a position that clashes with the P/E site bound tRNA. Mutants of EF-G that are impaired for translocation fail to disassemble post-termination complexes and exhibit lower activity in releasing RRF. We propose that the release of ribosome-bound RRF by EF-G is required for post-termination complex disassembly. Before release from the ribosome, the position of RRF on the ribosome will change from the original A/P site to a new location that clashes with tRNA on the P/E site.
延伸因子G(EF-G)和核糖体循环因子(RRF)可拆解核糖体、信使核糖核酸(mRNA)和转运核糖核酸(tRNA)的终止后复合物。RRF与70S核糖体和50S核糖体亚基形成稳定复合物。在此,我们发现EF-G可从70S核糖体和模型终止后复合物中释放RRF,但不能从50S核糖体亚基复合物中释放。GTP类似物可刺激EF-G释放结合的RRF。在存在夫西地酸和紫霉素的情况下会发生EF-G依赖性释放。然而,硫链丝菌素会抑制这种释放。研究表明,在存在GTP的情况下,RRF以弱得多的亲和力与EF-G-核糖体复合物结合,这表明EF-G可能在释放RRF的过程中将其移动到这个位置。另一方面,RRF在存在夫西地酸的情况下不与EF-G-核糖体复合物结合,这表明由夫西地酸稳定的EF-G并不代表天然的终止后复合物。相比之下,核糖体、EF-G和硫链丝菌素的复合物可以结合RRF,尽管亲和力较低。这些结果表明,硫链丝菌素捕获了一种中间复合物,其中RRF处于与P/E位点结合的tRNA发生冲突的位置。易位受损的EF-G突变体无法拆解终止后复合物,并且在释放RRF方面表现出较低的活性。我们提出,EF-G释放核糖体结合的RRF是终止后复合物拆解所必需的。在从核糖体释放之前,RRF在核糖体上的位置将从原来的A/P位点改变为与P/E位点上的tRNA发生冲突的新位置。