Division of Translational Medicine, Wadsworth Center, New York State Department of Health, Albany, NY, USA.
EMBO J. 2012 Apr 4;31(7):1836-46. doi: 10.1038/emboj.2012.22. Epub 2012 Mar 2.
The ribosome-recycling factor (RRF) and elongation factor-G (EF-G) disassemble the 70S post-termination complex (PoTC) into mRNA, tRNA, and two ribosomal subunits. We have determined cryo-electron microscopic structures of the PoTC·RRF complex, with and without EF-G. We find that domain II of RRF initially interacts with universally conserved residues of the 23S rRNA helices 43 and 95, and protein L11 within the 50S ribosomal subunit. Upon EF-G binding, both RRF and tRNA are driven towards the tRNA-exit (E) site, with a large rotational movement of domain II of RRF towards the 30S ribosomal subunit. During this intermediate step of the recycling process, domain II of RRF and domain IV of EF-G adopt hitherto unknown conformations. Furthermore, binding of EF-G to the PoTC·RRF complex reverts the ribosome from ratcheted to unratcheted state. These results suggest that (i) the ribosomal intersubunit reorganizations upon RRF binding and subsequent EF-G binding could be instrumental in destabilizing the PoTC and (ii) the modes of action of EF-G during tRNA translocation and ribosome-recycling steps are markedly different.
核糖体回收因子(RRF)和延伸因子-G(EF-G)将 70S 终止后复合物(PoTC)分解成 mRNA、tRNA 和两个核糖体亚基。我们已经确定了 PoTC·RRF 复合物与 EF-G 结合和不结合的冷冻电镜结构。我们发现 RRF 的结构域 II 最初与 23S rRNA 螺旋 43 和 95 的普遍保守残基以及 50S 核糖体亚基中的蛋白质 L11 相互作用。在 EF-G 结合后,RRF 和 tRNA 都被推向 tRNA 出口(E)位,RRF 的结构域 II 朝着 30S 核糖体亚基发生了很大的旋转运动。在这个循环过程的中间步骤中,RRF 的结构域 II 和 EF-G 的结构域 IV 采用了以前未知的构象。此外,EF-G 与 PoTC·RRF 复合物的结合使核糖体从棘轮状态恢复到非棘轮状态。这些结果表明:(i)RRF 结合和随后的 EF-G 结合引起的核糖体亚基间重组可能有助于破坏 PoTC;(ii)EF-G 在 tRNA 易位和核糖体循环步骤中的作用模式明显不同。