Nimri L F, Schallig H D F H
Department of Medical Laboratory Sciences, Jordan University of Science and Technology, P.O. Box 3030, Irbid 22110, Jordan.
Parasitology. 2003 Sep;127(Pt 3):201-5. doi: 10.1017/s0031182003003548.
Riboprinting is one of several molecular methods that can generate comparative data independently of the complexity of the organism's morphology. Restriction fragment length polymorphism (RFLP) profiles derived from digestion of polymerase chain reaction (PCR) products of the ribosomal 18S from Leishmania spp. yields a typical 'riboprint' profile that can vary intraspecifically. A selection of 76 stocks of L. major and L. tropica, isolated from patients with cutaneous leishmaniasis, was analysed by riboprinting to assess divergence within and between species. L. major and L. tropica could be easily differentiated from each other. Analysis of PCR-RFLP profiles indicated that stocks of Leishmania spp. could be broadly partitioned into 2 species corresponding to L. major and L. tropica. To test if ribosomal 18S sequences were homogeneous within each species, several isolates of each of the Leishmania spp. were digested. Interpretation of the riboprint profiles of the 18S independently amplified by PCR, there would appear to be one restriction pattern present within cach Leishmania spp. Homogeneity within copies of the ribosomal 18S within a single genome has, therefore, been demonstrated. The species designation established by riboprinting results were in agreement with the zymodeme analysis of the same isolates. The restriction patterns produced were simple, reproducible and easy to interpret.
核糖体印记法是几种分子方法之一,它能够独立于生物体形态的复杂性生成比较数据。从利什曼原虫属的核糖体18S聚合酶链反应(PCR)产物消化中获得的限制性片段长度多态性(RFLP)图谱产生了一种典型的“核糖体印记”图谱,该图谱在种内可能会有所不同。通过核糖体印记法分析了从皮肤利什曼病患者中分离出的76株硕大利什曼原虫和热带利什曼原虫,以评估种内和种间的差异。硕大利什曼原虫和热带利什曼原虫很容易相互区分。PCR-RFLP图谱分析表明,利什曼原虫属的菌株可大致分为对应于硕大利什曼原虫和热带利什曼原虫的两个物种。为了测试每个物种内核糖体18S序列是否一致,对每个利什曼原虫属的几个分离株进行了消化。对通过PCR独立扩增的18S核糖体印记图谱进行解读,每个利什曼原虫属内似乎存在一种限制性模式。因此,已证明单个基因组内核糖体18S拷贝的一致性得到了证明。核糖体印记法结果确定的物种名称与相同分离株的酶谱分析结果一致。产生的限制性模式简单、可重复且易于解读。