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IS5:大肠杆菌中转录的移动增强子。

IS5: a mobile enhancer of transcription in Escherichia coli.

作者信息

Schnetz K, Rak B

机构信息

Institut für Biologie III, Universität, Freiburg, Federal Republic of Germany.

出版信息

Proc Natl Acad Sci U S A. 1992 Feb 15;89(4):1244-8. doi: 10.1073/pnas.89.4.1244.

DOI:10.1073/pnas.89.4.1244
PMID:1311089
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC48425/
Abstract

The cryptic bgl operon of Escherichia coli is activated by the spontaneous insertion of mobile DNA elements. Screening of a collection of such mutations revealed insertion of the 1195-base-pair element IS5 into various positions both upstream and downstream of the bgl promoter P0. Activation of the operon was in all cases attributable to enhancement of P0 activity. Introduction of internal deletions into IS5 almost completely abolished P0 enhancement, demonstrating that enhancement is not simply the result of mutational inactivation of some inhibitory sequences. Intact copies of IS5 in trans restored the enhancing activity of the deletion derivatives. The trans-activator is encoded by IS5 gene ins5A, an essential transposition function. Activation of gene expression by means of interaction of a defective mobile element in cis with functions encoded by a nondefective element in trans has so far been described only for a maize controlling element.

摘要

大肠杆菌的隐秘bgl操纵子可被移动DNA元件的自发插入激活。对这类突变体文库的筛选揭示,1195个碱基对的元件IS5插入到了bgl启动子P0上下游的不同位置。在所有情况下,操纵子的激活都归因于P0活性的增强。对IS5进行内部缺失几乎完全消除了P0增强作用,这表明增强作用并非仅仅是某些抑制序列发生突变失活的结果。反式存在的完整IS5拷贝恢复了缺失衍生物的增强活性。反式激活因子由IS5基因ins5A编码,这是一种必需的转座功能。到目前为止,仅在玉米控制元件中描述过通过顺式存在的缺陷型移动元件与反式存在的无缺陷元件所编码的功能相互作用来激活基因表达的情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee8c/48425/d19045a4e33b/pnas01078-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee8c/48425/f8f9c390b05f/pnas01078-0106-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee8c/48425/13ecddf80038/pnas01078-0106-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee8c/48425/d19045a4e33b/pnas01078-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee8c/48425/f8f9c390b05f/pnas01078-0106-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee8c/48425/13ecddf80038/pnas01078-0106-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee8c/48425/d19045a4e33b/pnas01078-0107-a.jpg

相似文献

1
IS5: a mobile enhancer of transcription in Escherichia coli.IS5:大肠杆菌中转录的移动增强子。
Proc Natl Acad Sci U S A. 1992 Feb 15;89(4):1244-8. doi: 10.1073/pnas.89.4.1244.
2
Transcriptional activation of the Escherichia coli bgl operon: negative regulation by DNA structural elements near the promoter.大肠杆菌bgl操纵子的转录激活:启动子附近DNA结构元件的负调控
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Transcript analysis of Escherichia coli K-12 insertion element IS5.大肠杆菌K-12插入元件IS5的转录本分析
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Precise excision of IS5 from the intergenic region between the fucPIK and the fucAO operons and mutational control of fucPIK operon expression in Escherichia coli.精确切除大肠杆菌 fucPIK 和 fucAO 操纵子之间基因间区的 IS5 以及突变控制 fucPIK 操纵子的表达。
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Insertion element IS5 contains a third gene.插入元件IS5含有第三个基因。
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IS5 inserts upstream of the master motility operon flhDC in a quasi-Lamarckian way.IS5 通过准拉马克方式插入到主要运动操纵子 flhDC 的上游。
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Silencing of Escherichia coli bgl promoter by flanking sequence elements.侧翼序列元件对大肠杆菌bgl启动子的沉默作用
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Hopping into a hot seat: Role of DNA structural features on IS5-mediated gene activation and inactivation under stress.跳入热点:DNA结构特征在应激条件下对IS5介导的基因激活和失活的作用。
PLoS One. 2017 Jun 30;12(6):e0180156. doi: 10.1371/journal.pone.0180156. eCollection 2017.

引用本文的文献

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Nucleic Acids Res. 2025 Feb 27;53(5). doi: 10.1093/nar/gkaf172.
2
Investigating How Genomic Contexts Impact IS5 Transposition Within the Genome.研究基因组背景如何影响基因组内IS5转座
Microorganisms. 2024 Dec 16;12(12):2600. doi: 10.3390/microorganisms12122600.
3
H-NS is a bacterial transposon capture protein.H-NS 是一种细菌转座子捕获蛋白。

本文引用的文献

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Influence of transposable elements on the structure and function of the A1 gene of Zea mays.转座元件对玉米A1基因结构和功能的影响。
EMBO J. 1987 Feb;6(2):287-94. doi: 10.1002/j.1460-2075.1987.tb04752.x.
2
Insertion element IS5 contains a third gene.插入元件IS5含有第三个基因。
EMBO J. 1984 Apr;3(4):807-11. doi: 10.1002/j.1460-2075.1984.tb01889.x.
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New M13 vectors for cloning.用于克隆的新型M13载体。
Nat Commun. 2024 Aug 20;15(1):7137. doi: 10.1038/s41467-024-51407-5.
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Role of the ISKpn element in mediating mgrB gene mutations in ST11 hypervirulent colistin-resistant .ISKpn元件在介导ST11型高毒力耐黏菌素菌株中mgrB基因突变中的作用
Front Microbiol. 2023 Sep 28;14:1277320. doi: 10.3389/fmicb.2023.1277320. eCollection 2023.
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Laboratory evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance.实验室进化、转录组学和建模揭示了百草枯耐受的机制。
Cell Rep. 2023 Sep 26;42(9):113105. doi: 10.1016/j.celrep.2023.113105. Epub 2023 Sep 19.
6
Localization of Insertion Sequences in Plasmids for L-Cysteine Production in .在用于 L-半胱氨酸生产的质粒中插入序列的定位。
Genes (Basel). 2023 Jun 22;14(7):1317. doi: 10.3390/genes14071317.
7
De Novo Structural Variations of Escherichia coli Detected by Nanopore Long-Read Sequencing.纳米孔长读测序检测大肠杆菌的从头结构变异。
Genome Biol Evol. 2023 Jun 1;15(6). doi: 10.1093/gbe/evad106.
8
A self-propagating, barcoded transposon system for the dynamic rewiring of genomic networks.一种自我传播的、带有条码的转座子系统,用于基因组网络的动态重布线。
Mol Syst Biol. 2023 Jun 12;19(6):e11398. doi: 10.15252/msb.202211398. Epub 2023 Mar 27.
9
Diversity and prevalence of type VI secretion system effectors in clinical isolates.临床分离株中VI型分泌系统效应蛋白的多样性和流行情况。
Front Microbiol. 2023 Jan 4;13:1042505. doi: 10.3389/fmicb.2022.1042505. eCollection 2022.
10
How To Deal with Toxic Amino Acids: the Bipartite AzlCD Complex Exports Histidine in .如何应对毒性氨基酸:二组分 AzlCD 复合物输出组氨酸。
J Bacteriol. 2022 Dec 20;204(12):e0035322. doi: 10.1128/jb.00353-22. Epub 2022 Nov 15.
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Escherichia coli DNA topoisomerase I mutants have compensatory mutations in DNA gyrase genes.大肠杆菌DNA拓扑异构酶I突变体在DNA促旋酶基因中存在补偿性突变。
Cell. 1982 Nov;31(1):43-51. doi: 10.1016/0092-8674(82)90403-2.
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Gene. 1981 Dec;16(1-3):347-52. doi: 10.1016/0378-1119(81)90093-7.
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Structural analysis of insertion sequence IS5.插入序列IS5的结构分析
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7
Expression of two proteins from overlapping and oppositely oriented genes on transposable DNA insertion element IS5.转座DNA插入元件IS5上重叠且方向相反的基因所表达的两种蛋白质
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Nature. 1981 Oct 22;293(5834):625-9. doi: 10.1038/293625a0.
9
The nucleotide sequence of IS5 from Escherichia coli.来自大肠杆菌的IS5的核苷酸序列。
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