Shirsat N V, Bittenbender S, Kreider B L, Rovera G
Wistar Institute of Anatomy and Biology, Philadelphia, PA 19104.
Gene. 1992 Jan 15;110(2):229-33. doi: 10.1016/0378-1119(92)90653-7.
The structure and nucleotide sequence of the murine lactotransferrin-encoding gene (LTF) deduced partly by direct sequencing of genomic clones in the lambda phage vector and partly by enzymatic amplification of genomic DNA segments primed with the oligodeoxyribonucleotide primers homologous to the cDNA sequence. The lambda phage clones contained the 5' half of the gene corresponding to the first eight exons and an incomplete ninth exon interrupted by eight introns. Genomic clones corresponding to the 3' half of the LTF gene could not be obtained on repeated attempts from two different mouse genomic libraries, suggesting the possible presence of unclonable sequences in this part of the gene. Hence, PCR was used to clone the rest of the gene. Four out of the presumed eight remaining introns were cloned along with the flanking exons using PCR. Comparison of the structure of the LTF gene with those of the two other known transferrin-encoding genes, human serum transferrin-encoding gene and chicken ovotransferrin-encoding gene reveals that all three genes have a very similar intron-exon distribution pattern. The hypothesis that the present-day transferrin-encoding genes have originated from duplication of a common ancestral gene is confirmed here at the gene level. An interesting finding is the identification of a region of shared nucleotides between the 5' flanking regions of the murine LTF and myeloperoxidase-encoding genes, the two genes expressed specifically in neutrophilic granulocytes.
小鼠乳铁传递蛋白编码基因(LTF)的结构和核苷酸序列,部分是通过对λ噬菌体载体中的基因组克隆进行直接测序推导得出,部分是通过用与cDNA序列同源的寡脱氧核糖核苷酸引物对基因组DNA片段进行酶促扩增得出。λ噬菌体克隆包含该基因的5'端一半,对应于前八个外显子和一个不完整的第九外显子,该外显子被八个内含子打断。在对两个不同的小鼠基因组文库进行多次尝试后,未能获得与LTF基因3'端一半相对应的基因组克隆,这表明该基因的这一部分可能存在不可克隆的序列。因此,使用聚合酶链反应(PCR)来克隆该基因的其余部分。使用PCR克隆了推测的其余八个内含子中的四个以及侧翼外显子。将LTF基因的结构与另外两个已知的转铁蛋白编码基因(人血清转铁蛋白编码基因和鸡卵转铁蛋白编码基因)的结构进行比较,发现所有三个基因具有非常相似的内含子-外显子分布模式。当今的转铁蛋白编码基因起源于一个共同祖先基因的复制这一假设在基因水平上得到了证实。一个有趣的发现是,在小鼠LTF和髓过氧化物酶编码基因的5'侧翼区域之间鉴定出一个共享核苷酸区域,这两个基因在嗜中性粒细胞中特异性表达。