• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大利什曼原虫动质体大环DNA中的一个基因间富含G的区域是一个编码核糖体蛋白S12的泛编辑隐基因。

An intergenic G-rich region in Leishmania tarentolae kinetoplast maxicircle DNA is a pan-edited cryptogene encoding ribosomal protein S12.

作者信息

Maslov D A, Sturm N R, Niner B M, Gruszynski E S, Peris M, Simpson L

机构信息

Department of Biology, University of California, Los Angeles 90024.

出版信息

Mol Cell Biol. 1992 Jan;12(1):56-67. doi: 10.1128/mcb.12.1.56-67.1992.

DOI:10.1128/mcb.12.1.56-67.1992
PMID:1370342
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC364069/
Abstract

Six short G-rich intergenic regions in the maxicircle of Leishmania tarentolae are conserved in location and polarity in two other kinetoplastid species. We show here that G-rich region 6 (G6) represents a pan-edited cryptogene which contains at least two domains edited independently in a 3'-to-5' manner connected by short unedited regions. In the completely edited RNA, 117 uridines are added at 49 sites and 32 uridines are deleted at 13 sites, creating a translated 85-amino-acid polypeptide. Similar polypeptides are probably encoded by pan-edited G6 transcripts in two other species. The G6 polypeptide has significant sequence similarity to the family of S12 ribosomal proteins. A minicircle-encoded gRNA overlaps 12 editing sites in G6 mRNA, and chimeric gRNA/mRNA molecules were shown to exist, in agreement with the transesterification model for editing.

摘要

大利什曼原虫(Leishmania tarentolae)大环中的六个富含鸟嘌呤的短基因间区域在位置和极性上在另外两种动质体物种中是保守的。我们在此表明,富含鸟嘌呤的区域6(G6)代表一个泛编辑隐基因,它包含至少两个以3'到5'方式独立编辑的结构域,由短的未编辑区域连接。在完全编辑的RNA中,在49个位点添加了117个尿苷,在13个位点删除了32个尿苷,产生了一个翻译后的85个氨基酸的多肽。另外两个物种中可能由泛编辑的G6转录本编码类似的多肽。G6多肽与S12核糖体蛋白家族具有显著的序列相似性。一个小环编码的引导RNA(gRNA)与G6 mRNA中的12个编辑位点重叠,并且已证明存在嵌合的gRNA/mRNA分子,这与编辑的转酯模型一致。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eca/364069/da123efbad35/molcellb00025-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eca/364069/8f4210d1be62/molcellb00025-0082-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eca/364069/da123efbad35/molcellb00025-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eca/364069/8f4210d1be62/molcellb00025-0082-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3eca/364069/da123efbad35/molcellb00025-0086-a.jpg

相似文献

1
An intergenic G-rich region in Leishmania tarentolae kinetoplast maxicircle DNA is a pan-edited cryptogene encoding ribosomal protein S12.大利什曼原虫动质体大环DNA中的一个基因间富含G的区域是一个编码核糖体蛋白S12的泛编辑隐基因。
Mol Cell Biol. 1992 Jan;12(1):56-67. doi: 10.1128/mcb.12.1.56-67.1992.
2
Leishmania tarentolae minicircles of different sequence classes encode single guide RNAs located in the variable region approximately 150 bp from the conserved region.不同序列类别的大利什曼原虫微型环编码位于距保守区约150 bp的可变区的单向导RNA。
Nucleic Acids Res. 1991 Nov 25;19(22):6277-81. doi: 10.1093/nar/19.22.6277.
3
The polarity of editing within a multiple gRNA-mediated domain is due to formation of anchors for upstream gRNAs by downstream editing.
Cell. 1992 Aug 7;70(3):459-67. doi: 10.1016/0092-8674(92)90170-h.
4
A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information.动质体线粒体中RNA编辑的一种模型:从大环DNA转录而来的“引导”RNA分子提供编辑信息。
Cell. 1990 Jan 26;60(2):189-98. doi: 10.1016/0092-8674(90)90735-w.
5
Demonstration of mRNA editing and localization of guide RNA genes in kinetoplast-mitochondria of the plant trypanosomatid Phytomonas serpens.植物锥虫 Phytomonas serpens 动质体线粒体中 mRNA 编辑及引导 RNA 基因定位的证明
Mol Biochem Parasitol. 1998 Jun 1;93(2):225-36. doi: 10.1016/s0166-6851(98)00028-0.
6
Disruption of RNA editing in Leishmania tarentolae by the loss of minicircle-encoded guide RNA genes.
EMBO J. 1994 Dec 1;13(23):5689-700. doi: 10.1002/j.1460-2075.1994.tb06907.x.
7
Editing and misediting of transcripts of the kinetoplast maxicircle G5 (ND3) cryptogene in an old laboratory strain of Leishmania tarentolae.
Mol Biochem Parasitol. 1994 Nov;68(1):155-9. doi: 10.1016/0166-6851(94)00160-x.
8
Maxicircle DNA and edited mRNA sequences of closely related trypanosome species: implications of kRNA editing for evolution of maxicircle genomes.密切相关的锥虫物种的大环DNA和编辑后的mRNA序列:kRNA编辑对大环基因组进化的影响
Nucleic Acids Res. 1993 Aug 25;21(17):4073-8. doi: 10.1093/nar/21.17.4073.
9
Evidence of RNA editing in Leishmania braziliensis promastigotes.巴西利什曼原虫前鞭毛体中的 RNA 编辑证据。
Parasitol Res. 2011 Mar;108(3):731-9. doi: 10.1007/s00436-010-2190-6. Epub 2010 Dec 4.
10
Kinetoplast DNA minicircles encode guide RNAs for editing of cytochrome oxidase subunit III mRNA.动质体DNA小环编码用于编辑细胞色素氧化酶亚基III mRNA的引导RNA。
Cell. 1990 Jun 1;61(5):879-84. doi: 10.1016/0092-8674(90)90198-n.

引用本文的文献

1
Mitochondrial RNA editing in : New tools, new revelations.线粒体RNA编辑:新工具,新发现。
Comput Struct Biotechnol J. 2022 Nov 14;20:6388-6402. doi: 10.1016/j.csbj.2022.11.023. eCollection 2022.
2
Mitogenome sequence of a Black Sea isolate of the kinetoplastid .动质体纲黑海分离株的线粒体基因组序列
Mitochondrial DNA B Resour. 2018 Sep 10;3(2):968-969. doi: 10.1080/23802359.2018.1507654.
3
Mitochondrial RNA quality control in trypanosomes.线粒体 RNA 质量控制在锥虫中的研究。

本文引用的文献

1
A simple method for displaying the hydropathic character of a protein.一种展示蛋白质亲水性特征的简单方法。
J Mol Biol. 1982 May 5;157(1):105-32. doi: 10.1016/0022-2836(82)90515-0.
2
DNA sequences from the str operon of Escherichia coli.来自大肠杆菌str操纵子的DNA序列。
J Biol Chem. 1980 May 25;255(10):4660-6.
3
Sequence heterogeneity and anomalous electrophoretic mobility of kinetoplast minicircle DNA from Leishmania tarentolae.来自热带利什曼原虫的动基体小环DNA的序列异质性和异常电泳迁移率
Wiley Interdiscip Rev RNA. 2021 May;12(3):e1638. doi: 10.1002/wrna.1638. Epub 2020 Dec 16.
4
Separating the Wheat from the Chaff: RNA Editing and Selection of Translatable mRNA in Trypanosome Mitochondria.去伪存真:锥虫线粒体中的RNA编辑与可翻译mRNA的选择
Pathogens. 2019 Jul 18;8(3):105. doi: 10.3390/pathogens8030105.
5
Transcription initiation defines kinetoplast RNA boundaries.转录起始定义动基体 RNA 边界。
Proc Natl Acad Sci U S A. 2018 Oct 30;115(44):E10323-E10332. doi: 10.1073/pnas.1808981115. Epub 2018 Oct 17.
6
High throughput sequencing revolution reveals conserved fundamentals of U-indel editing.高通量测序革命揭示了U-插入缺失编辑的保守基本原理。
Wiley Interdiscip Rev RNA. 2018 Sep;9(5):e1487. doi: 10.1002/wrna.1487. Epub 2018 Jun 11.
7
Cultured bloodstream Trypanosoma brucei adapt to life without mitochondrial translation release factor 1.培养的血液利什曼原虫适应没有线粒体翻译释放因子 1 的生活。
Sci Rep. 2018 Mar 23;8(1):5135. doi: 10.1038/s41598-018-23472-6.
8
Trypanosomatid mitochondrial RNA editing: dramatically complex transcript repertoires revealed with a dedicated mapping tool.锥虫线粒体 RNA 编辑:专用图谱工具揭示出的极其复杂的转录组。
Nucleic Acids Res. 2018 Jan 25;46(2):765-781. doi: 10.1093/nar/gkx1202.
9
Kinetoplast DNA-encoded ribosomal protein S12: a possible functional link between mitochondrial RNA editing and translation in Trypanosoma brucei.动基体 DNA 编码核糖体蛋白 S12:在布氏锥虫中线粒体 RNA 编辑与翻译之间可能的功能联系。
RNA Biol. 2013 Nov;10(11):1679-88. doi: 10.4161/rna.26733. Epub 2013 Oct 14.
10
Massively convergent evolution for ribosomal protein gene content in plastid and mitochondrial genomes.质体和线粒体基因组中核糖体蛋白基因含量的大规模趋同进化。
Genome Biol Evol. 2013;5(12):2318-29. doi: 10.1093/gbe/evt181.
Gene. 1984 Mar;27(3):265-77. doi: 10.1016/0378-1119(84)90071-4.
4
The genes for the ribosomal proteins S12 and S7 are clustered with the gene for the EF-Tu protein on the chloroplast genome of Euglena gracilis.核糖体蛋白S12和S7的基因与EF-Tu蛋白的基因聚集在纤细裸藻叶绿体基因组上。
Nucleic Acids Res. 1984 Mar 26;12(6):2851-9. doi: 10.1093/nar/12.6.2851.
5
Los Alamos sequence analysis package for nucleic acids and proteins.洛斯阿拉莫斯核酸与蛋白质序列分析软件包。
Nucleic Acids Res. 1982 Jan 11;10(1):183-96. doi: 10.1093/nar/10.1.183.
6
Studies on kinetoplast DNA. 3. Kinetic complexity of kinetoplast and nuclear DNA from Leishmania tarentolae.动质体DNA研究。3. 来自热带利什曼原虫的动质体和核DNA的动力学复杂性。
Biochim Biophys Acta. 1973 Sep 7;319(3):267-76. doi: 10.1016/0005-2787(73)90165-2.
7
Isolation of kinetoplast-mitochondrial complexes from Leishmania tarentolae.从热带利什曼原虫中分离动基体-线粒体复合物。
J Protozool. 1974 Nov;21(5):782-90. doi: 10.1111/j.1550-7408.1974.tb03752.x.
8
Synchronization of Leishmania tarentolae by hydroxyurea.用羟基脲使沙氏利什曼原虫同步化
J Protozool. 1970 Nov;17(4):511-7. doi: 10.1111/j.1550-7408.1970.tb04719.x.
9
Base composition-independent hybridization in tetramethylammonium chloride: a method for oligonucleotide screening of highly complex gene libraries.在氯化铵中与碱基组成无关的杂交:一种用于高度复杂基因文库寡核苷酸筛选的方法。
Proc Natl Acad Sci U S A. 1985 Mar;82(6):1585-8. doi: 10.1073/pnas.82.6.1585.
10
A minimal ribosomal RNA: sequence and secondary structure of the 9S kinetoplast ribosomal RNA from Leishmania tarentolae.一种最小核糖体RNA:来自热带利什曼原虫的9S动质体核糖体RNA的序列和二级结构
Proc Natl Acad Sci U S A. 1985 Mar;82(5):1401-5. doi: 10.1073/pnas.82.5.1401.