• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在DNA胞嘧啶甲基转移酶中保守的半胱氨酸替换会导致多种表型。

Substitutions of a cysteine conserved among DNA cytosine methylases result in a variety of phenotypes.

作者信息

Wyszynski M W, Gabbara S, Bhagwat A S

机构信息

Department of Chemistry, Wayne State University, Detroit, MI 48202.

出版信息

Nucleic Acids Res. 1992 Jan 25;20(2):319-26. doi: 10.1093/nar/20.2.319.

DOI:10.1093/nar/20.2.319
PMID:1371346
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC310373/
Abstract

The proposed mechanism for DNA (cytosine-5)-methyltransferases envisions a key role for a cysteine residue. It is expected to form a covalent link with carbon 6 of the target cytosine, activating the normally inactive carbon 5 for methyl transfer. There is a single conserved cysteine among all DNA (cytosine-5)-methyltransferases making it the candidate nucleophile. We have changed this cysteine to other amino acids for the EcoRII methylase; which methylates the second cytosine in the sequence 5'-CCWGG-3'. Mutants were tested for their methyl transferring ability and for their ability to form covalent complexes with DNA. The latter property was tested indirectly with the use of a genetic assay involving sensitivity of cells to 5-azacytidine. Replacement of the conserved cysteine with glycine, valine, tryptophan or serine led to an apparent loss of methyl transferring ability. Interestingly, cells carrying the mutant with serine did show sensitivity to 5-azacytidine, suggesting the ability to link to DNA. Unexpectedly, substitution of the cysteine with glycine results in the inhibition of cell growth and the mutant allele can be maintained in the cells only when it is poorly expressed. These results suggest that the conserved cysteine in the EcoRII methylase is essential for methylase action and it may play more than one role in it.

摘要

针对DNA(胞嘧啶-5)-甲基转移酶提出的作用机制设想了一个半胱氨酸残基的关键作用。预计它会与目标胞嘧啶的C6形成共价连接,激活通常无活性的C5以进行甲基转移。在所有DNA(胞嘧啶-5)-甲基转移酶中存在一个单一的保守半胱氨酸,使其成为候选亲核试剂。我们已将EcoRII甲基转移酶中的这个半胱氨酸替换为其他氨基酸;EcoRII甲基转移酶可使序列5'-CCWGG-3'中的第二个胞嘧啶甲基化。对突变体进行了甲基转移能力以及与DNA形成共价复合物能力的测试。后者的特性通过涉及细胞对5-氮杂胞苷敏感性的遗传测定进行间接测试。将保守半胱氨酸替换为甘氨酸、缬氨酸、色氨酸或丝氨酸导致甲基转移能力明显丧失。有趣的是,携带丝氨酸突变体的细胞确实对5-氮杂胞苷敏感,表明其具有与DNA连接的能力。出乎意料的是,用甘氨酸替代半胱氨酸会导致细胞生长受到抑制,并且只有在突变等位基因表达不佳时才能在细胞中维持。这些结果表明,EcoRII甲基转移酶中的保守半胱氨酸对于甲基转移酶的作用至关重要,并且它可能在其中发挥不止一种作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f747/310373/fe396bbe653a/nar00076-0155-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f747/310373/fe396bbe653a/nar00076-0155-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f747/310373/fe396bbe653a/nar00076-0155-a.jpg

相似文献

1
Substitutions of a cysteine conserved among DNA cytosine methylases result in a variety of phenotypes.在DNA胞嘧啶甲基转移酶中保守的半胱氨酸替换会导致多种表型。
Nucleic Acids Res. 1992 Jan 25;20(2):319-26. doi: 10.1093/nar/20.2.319.
2
The cysteine conserved among DNA cytosine methylases is required for methyl transfer, but not for specific DNA binding.DNA胞嘧啶甲基转移酶中保守的半胱氨酸是甲基转移所必需的,但不是特异性DNA结合所必需的。
Nucleic Acids Res. 1993 Jan 25;21(2):295-301. doi: 10.1093/nar/21.2.295.
3
The DNA binding affinity of HhaI methylase is increased by a single amino acid substitution in the catalytic center.HhaI甲基化酶的DNA结合亲和力通过催化中心的单个氨基酸取代而增强。
Nucleic Acids Res. 1993 May 25;21(10):2459-64. doi: 10.1093/nar/21.10.2459.
4
Function of Pro-185 in the ProCys of conserved motif IV in the EcoRII [cytosine-C5]-DNA methyltransferase.Pro-185在EcoRII [胞嘧啶-C5]-DNA甲基转移酶保守基序IV的ProCys中的功能。
FEBS Lett. 1995 Aug 14;370(1-2):75-7. doi: 10.1016/0014-5793(95)00795-b.
5
Cytosine methyltransferase from Escherichia coli in which active site cysteine is replaced with serine is partially active.来自大肠杆菌的胞嘧啶甲基转移酶,其中活性位点的半胱氨酸被丝氨酸取代,具有部分活性。
Biochemistry. 1995 Jul 11;34(27):8914-23. doi: 10.1021/bi00027a044.
6
Overproduction of DNA cytosine methyltransferases causes methylation and C --> T mutations at non-canonical sites.DNA胞嘧啶甲基转移酶的过度产生会导致非规范位点的甲基化和C→T突变。
J Biol Chem. 1996 Mar 29;271(13):7851-9. doi: 10.1074/jbc.271.13.7851.
7
[Effect of 5-azacytidine on E. coli cells with different DNA-methylases].[5-氮杂胞苷对具有不同DNA甲基化酶的大肠杆菌细胞的影响]
Biokhimiia. 1985 May;50(5):749-54.
8
Autogenous regulation of the EcoRII methylase gene at the transcriptional level: effect of 5-azacytidine.EcoRII甲基化酶基因在转录水平的自身调控:5-氮杂胞苷的作用
EMBO J. 1993 Nov;12(11):4297-303. doi: 10.1002/j.1460-2075.1993.tb06114.x.
9
Reviving a dead enzyme: cytosine deaminations promoted by an inactive DNA methyltransferase and an S-adenosylmethionine analogue.复活失活的酶:由无活性的DNA甲基转移酶和S-腺苷甲硫氨酸类似物促进的胞嘧啶脱氨基作用
Biochemistry. 2000 Nov 28;39(47):14611-6. doi: 10.1021/bi001610e.
10
Studies on the function of conserved sequence motifs in the T4 Dam-[N6-adenine] and EcoRII [C5-cytosine] DNA methyltransferases.T4 Dam-[N6-腺嘌呤]和EcoRII [C5-胞嘧啶] DNA甲基转移酶中保守序列基序功能的研究。
Gene. 1995 May 19;157(1-2):125-6. doi: 10.1016/0378-1119(94)00636-7.

引用本文的文献

1
A GCDGC-specific DNA (cytosine-5) methyltransferase that methylates the GCWGC sequence on both strands and the GCSGC sequence on one strand.一种特异性识别 GCDGC 的 DNA(胞嘧啶-5)甲基转移酶,可甲基化两条链上的 GCWGC 序列和一条链上的 GCSGC 序列。
PLoS One. 2022 Mar 21;17(3):e0265225. doi: 10.1371/journal.pone.0265225. eCollection 2022.
2
Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase.数百万年后,在去甲基转移酶的古老丢失后,DNA 甲基化的进化仍得以维持。
Cell. 2020 Jan 23;180(2):263-277.e20. doi: 10.1016/j.cell.2019.12.012. Epub 2020 Jan 16.
3

本文引用的文献

1
Regulation of ribosomal RNA promoters with a synthetic lac operator.利用合成的乳糖操纵子调控核糖体RNA启动子
Proc Natl Acad Sci U S A. 1984 Nov;81(22):6929-33. doi: 10.1073/pnas.81.22.6929.
2
Covalent bond formation between a DNA-cytosine methyltransferase and DNA containing 5-azacytosine.DNA胞嘧啶甲基转移酶与含5-氮杂胞嘧啶的DNA之间的共价键形成。
Proc Natl Acad Sci U S A. 1984 Nov;81(22):6993-7. doi: 10.1073/pnas.81.22.6993.
3
On the mechanism of inhibition of DNA-cytosine methyltransferases by cytosine analogs.关于胞嘧啶类似物对DNA胞嘧啶甲基转移酶的抑制机制
Engineering of a Histone-Recognition Domain in Dnmt3a Alters the Epigenetic Landscape and Phenotypic Features of Mouse ESCs.
Dnmt3a中组蛋白识别结构域的工程改造改变了小鼠胚胎干细胞的表观遗传格局和表型特征。
Mol Cell. 2015 Jul 2;59(1):89-103. doi: 10.1016/j.molcel.2015.05.017. Epub 2015 Jun 11.
4
Functions that Protect Escherichia coli from Tightly Bound DNA-Protein Complexes Created by Mutant EcoRII Methyltransferase.保护大肠杆菌免受突变型EcoRII甲基转移酶产生的紧密结合的DNA-蛋白质复合物影响的功能。
PLoS One. 2015 May 19;10(5):e0128092. doi: 10.1371/journal.pone.0128092. eCollection 2015.
5
Sequence-structure-function studies of tRNA:m5C methyltransferase Trm4p and its relationship to DNA:m5C and RNA:m5U methyltransferases.转运RNA:5-甲基胞嘧啶甲基转移酶Trm4p的序列-结构-功能研究及其与DNA:5-甲基胞嘧啶和RNA:5-尿嘧啶甲基转移酶的关系。
Nucleic Acids Res. 2004 Apr 30;32(8):2453-63. doi: 10.1093/nar/gkh564. Print 2004.
6
Characterisation of site-biased DNA methyltransferases: specificity, affinity and subsite relationships.位点偏向性DNA甲基转移酶的表征:特异性、亲和力及亚位点关系
Nucleic Acids Res. 2002 Sep 1;30(17):3818-30. doi: 10.1093/nar/gkf501.
7
Role of DNA minor groove interactions in substrate recognition by the M.SinI and M.EcoRII DNA (cytosine-5) methyltransferases.DNA小沟相互作用在M.SinI和M.EcoRII DNA(胞嘧啶-5)甲基转移酶底物识别中的作用
Nucleic Acids Res. 2001 Aug 1;29(15):3188-94. doi: 10.1093/nar/29.15.3188.
8
Plant DNA methyltransferases.植物DNA甲基转移酶
Plant Mol Biol. 2000 Jun;43(2-3):189-201. doi: 10.1023/a:1006427226972.
9
In vivo activity of murine de novo methyltransferases, Dnmt3a and Dnmt3b.小鼠从头甲基转移酶Dnmt3a和Dnmt3b的体内活性。
Mol Cell Biol. 1999 Dec;19(12):8211-8. doi: 10.1128/MCB.19.12.8211.
10
DNA binding and methyl transfer catalysed by mouse DNA methyltransferase.小鼠DNA甲基转移酶催化的DNA结合与甲基转移
Biochem J. 1995 Dec 15;312 ( Pt 3)(Pt 3):855-61. doi: 10.1042/bj3120855.
Cell. 1983 May;33(1):9-10. doi: 10.1016/0092-8674(83)90327-6.
4
Rapid and efficient site-specific mutagenesis without phenotypic selection.无需表型筛选的快速高效位点特异性诱变。
Proc Natl Acad Sci U S A. 1985 Jan;82(2):488-92. doi: 10.1073/pnas.82.2.488.
5
Kinetic and catalytic mechanism of HhaI methyltransferase.HhaI甲基转移酶的动力学和催化机制。
J Biol Chem. 1987 Apr 5;262(10):4778-86.
6
Cytosine-specific DNA modification interferes with plasmid establishment in Escherichia coli K12: involvement of rglB.胞嘧啶特异性DNA修饰干扰大肠杆菌K12中质粒的建立:rglB的作用。
Mol Gen Genet. 1986 Dec;205(3):469-75. doi: 10.1007/BF00338084.
7
Functional role of cysteine-146 in Escherichia coli thymidylate synthase.大肠杆菌胸苷酸合成酶中半胱氨酸146的功能作用。
Proc Natl Acad Sci U S A. 1988 Mar;85(5):1472-6. doi: 10.1073/pnas.85.5.1472.
8
5-Fluorocytosine in DNA is a mechanism-based inhibitor of HhaI methylase.DNA中的5-氟胞嘧啶是一种基于机制的HhaI甲基化酶抑制剂。
Biochemistry. 1988 Jul 12;27(14):5204-10. doi: 10.1021/bi00414a039.
9
A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes.一种用于特异性基因的可控专一性表达的噬菌体T7 RNA聚合酶/启动子系统。
Proc Natl Acad Sci U S A. 1985 Feb;82(4):1074-8. doi: 10.1073/pnas.82.4.1074.
10
Sequential order of target-recognizing domains in multispecific DNA-methyltransferases.多特异性DNA甲基转移酶中靶标识别结构域的顺序
EMBO J. 1988 Aug;7(8):2601-9. doi: 10.1002/j.1460-2075.1988.tb03110.x.