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小鼠DNA甲基转移酶催化的DNA结合与甲基转移

DNA binding and methyl transfer catalysed by mouse DNA methyltransferase.

作者信息

Reale A, Lindsay H, Saluz H P, Pradhan S, Adams R L, Jost J P, Strom R

机构信息

Institute of Biomedical and Life Sciences, University of Glasgow, Scotland, U.K.

出版信息

Biochem J. 1995 Dec 15;312 ( Pt 3)(Pt 3):855-61. doi: 10.1042/bj3120855.

DOI:10.1042/bj3120855
PMID:8554531
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1136193/
Abstract

By using a purified fraction of mouse DNA methyltransferase we have shown, by gel-retardation analysis, that the enzyme forms a low-affinity complex preferentially with hemimethylated DNA; the complexes formed with unmethylated or with fully methylated DNA are of even lower affinity, and only very weak interaction occurs with DNA lacking CG dinucleotides. Interaction is inhibited by N-ethylmaleimide. Methyl transfer from S-adenosyl-methionine is associated with the release of the fully methylated product from the complex. Complexes formed with the intact enzyme are extremely large, but limited trypsin treatment allows a major complex to enter the gel. DNA binding is not inhibited by this limited proteolysis of the native enzyme.

摘要

通过使用纯化的小鼠DNA甲基转移酶组分,我们通过凝胶阻滞分析表明,该酶优先与半甲基化DNA形成低亲和力复合物;与未甲基化或完全甲基化DNA形成的复合物亲和力更低,并且与缺乏CG二核苷酸的DNA仅发生非常微弱的相互作用。相互作用受到N-乙基马来酰亚胺的抑制。从S-腺苷甲硫氨酸的甲基转移与复合物中完全甲基化产物的释放相关。与完整酶形成的复合物非常大,但有限的胰蛋白酶处理可使主要复合物进入凝胶。天然酶的这种有限蛋白水解不会抑制DNA结合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c32/1136193/fd4a58a100c7/biochemj00049-0205-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c32/1136193/572ce091d80a/biochemj00049-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c32/1136193/35f3ca82f970/biochemj00049-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c32/1136193/fd4a58a100c7/biochemj00049-0205-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c32/1136193/572ce091d80a/biochemj00049-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c32/1136193/35f3ca82f970/biochemj00049-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c32/1136193/fd4a58a100c7/biochemj00049-0205-a.jpg

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引用本文的文献

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Spreading of methylation along DNA.甲基化沿DNA的传播。
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本文引用的文献

1
Determination of the order of substrate addition to MspI DNA methyltransferase using a novel mechanism-based inhibitor.利用一种基于新机制的抑制剂确定底物添加到MspI DNA甲基转移酶的顺序
Biochem J. 1993 Apr 15;291 ( Pt 2)(Pt 2):493-504. doi: 10.1042/bj2910493.
2
Effects of co-factor and deoxycytidine substituted oligonucleotides upon sequence-specific interactions between MspI DNA methyltransferase and DNA.辅因子和脱氧胞苷取代的寡核苷酸对MspI DNA甲基转移酶与DNA之间序列特异性相互作用的影响。
J Mol Biol. 1993 Apr 5;230(3):779-86. doi: 10.1006/jmbi.1993.1200.
3
Regulation of de novo methylation.
从头甲基化的调控
EXS. 1993;64:120-44. doi: 10.1007/978-3-0348-9118-9_6.
4
Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine.与S-腺苷-L-甲硫氨酸复合的HhaI DNA甲基转移酶的晶体结构。
Cell. 1993 Jul 30;74(2):299-307. doi: 10.1016/0092-8674(93)90421-l.
5
HhaI methyltransferase flips its target base out of the DNA helix.HhaI甲基转移酶将其靶碱基翻转出DNA螺旋。
Cell. 1994 Jan 28;76(2):357-69. doi: 10.1016/0092-8674(94)90342-5.
6
DNA recognition by the EcoK methyltransferase. The influence of DNA methylation and the cofactor S-adenosyl-L-methionine.EcoK甲基转移酶对DNA的识别。DNA甲基化和辅因子S-腺苷-L-甲硫氨酸的影响。
J Mol Biol. 1993 Nov 5;234(1):60-71. doi: 10.1006/jmbi.1993.1563.
7
Sequencing end-labeled DNA with base-specific chemical cleavages.通过碱基特异性化学切割对末端标记的DNA进行测序。
Methods Enzymol. 1980;65(1):499-560. doi: 10.1016/s0076-6879(80)65059-9.
8
Mouse ascites DNA methylase: characterisation of size, proteolytic breakdown and nucleotide recognition.小鼠腹水DNA甲基化酶:大小、蛋白水解降解及核苷酸识别特性
Biochim Biophys Acta. 1986 Oct 16;868(1):9-16. doi: 10.1016/0167-4781(86)90080-1.
9
Affinity purification of sequence-specific DNA binding proteins.序列特异性DNA结合蛋白的亲和纯化
Proc Natl Acad Sci U S A. 1986 Aug;83(16):5889-93. doi: 10.1073/pnas.83.16.5889.
10
Mouse DNA methylase. Intracellular location and degradation.小鼠DNA甲基化酶。细胞内定位与降解。
Cell Biophys. 1989 Aug-Oct;15(1-2):113-26. doi: 10.1007/BF02991584.