• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

受限作用作为大分子结构和反应活性的一个决定因素。

Confinement as a determinant of macromolecular structure and reactivity.

作者信息

Minton A P

机构信息

Laboratory of Biochemical Pharmacology, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892.

出版信息

Biophys J. 1992 Oct;63(4):1090-100. doi: 10.1016/S0006-3495(92)81663-6.

DOI:10.1016/S0006-3495(92)81663-6
PMID:1420928
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1262248/
Abstract

The confinement of macromolecules within enclosures or "pores" of comparable dimensions results in significant size- and shape-dependent alterations of macromolecular chemical potential and reactivity. Calculations of the magnitude of this effect for model particles of different shapes in model enclosures of different shapes were carried out using hard particle partition theory developed by Giddings et al. (J. Phys. Chem. 1968. 72:4397-4408). Results obtained indicate that the equilibrium constants of reactions, such as isomerization, self-association, and site binding, that result in significant change in macromolecular size, shape, and/or mobility may be altered within pores by as much as several orders of magnitude relative to the value in the unbounded or bulk phase. Confinement also produces a substantial size-dependent outward force on the walls of an enclosure. These results are likely to be important within the fluid phase of biological media, such as the cytoplasm of eukaryotic cells, containing significant volume fractions of large fibrous structures (e.g., the cytomatrix).

摘要

将大分子限制在尺寸相当的封闭空间或“孔”内,会导致大分子化学势和反应性在大小和形状上发生显著变化。利用吉丁斯等人(《物理化学杂志》,1968年,72卷:4397 - 4408页)提出的硬粒子分配理论,对不同形状的模型封闭空间中不同形状的模型粒子的这种效应大小进行了计算。所得结果表明,诸如异构化、自缔合和位点结合等导致大分子大小、形状和/或迁移率发生显著变化的反应的平衡常数,在孔内相对于无界或本体相中的值可能会改变几个数量级。限制还会在封闭空间壁上产生显著的尺寸依赖性外向力。这些结果在生物介质的流体相中可能很重要,例如真核细胞的细胞质,其中含有大量体积分数的大型纤维结构(如细胞基质)。

相似文献

1
Confinement as a determinant of macromolecular structure and reactivity.受限作用作为大分子结构和反应活性的一个决定因素。
Biophys J. 1992 Oct;63(4):1090-100. doi: 10.1016/S0006-3495(92)81663-6.
2
Confinement as a determinant of macromolecular structure and reactivity. II. Effects of weakly attractive interactions between confined macrosolutes and confining structures.受限作为大分子结构和反应性的一个决定因素。II. 受限大分子溶质与限制结构之间弱吸引相互作用的影响。
Biophys J. 1995 Apr;68(4):1311-22. doi: 10.1016/S0006-3495(95)80304-8.
3
[Multicenter model of conformation transitions in biopolymers. I. Equilibrium transition curve].[生物聚合物构象转变的多中心模型。I. 平衡转变曲线]
Biofizika. 1974 May-Jun;19(3):415-9.
4
Equilibrium partitioning of macromolecules in confining geometries: improved universality with a new molecular size parameter.受限几何结构中大分子的平衡分配:采用新的分子大小参数提高通用性
J Chem Phys. 2008 Mar 28;128(12):124904. doi: 10.1063/1.2842073.
5
On an exact starting expression for macromolecular hydrodynamic models.关于大分子流体动力学模型的精确起始表达式。
Biopolymers. 1986 Apr;25(4):627-37. doi: 10.1002/bip.360250408.
6
Diffusion-controlled macromolecular interactions.扩散控制的大分子相互作用。
Annu Rev Biophys Biophys Chem. 1985;14:131-60. doi: 10.1146/annurev.bb.14.060185.001023.
7
Does the ligand-biopolymer equilibrium binding constant depend on the number of bound ligands?配体-生物聚合物平衡结合常数是否取决于结合的配体数量?
Biopolymers. 2010 Nov;93(11):932-5. doi: 10.1002/bip.21512.
8
A remarkable shape-catalytic effect of confinement on the rotational isomerization of small hydrocarbons.受限环境对小分子烃旋转异构化具有显著的形状催化作用。
J Chem Phys. 2008 Jan 21;128(3):034704. doi: 10.1063/1.2819238.
9
Viscoelasticity of rigid macromolecules with irregular shapes in the limit of overwhelming Brownian motion.在强布朗运动极限下具有不规则形状的刚性大分子的粘弹性。
Biopolymers. 1984 Nov;23(11 Pt 1):2243-78. doi: 10.1002/bip.360231110.
10
Cooperative binding of n-mers with steric hindrance to finite and infinite one-dimensional lattices.具有空间位阻的n聚体与有限和无限一维晶格的协同结合。
Biopolymers. 1982 May;21(5):979-84. doi: 10.1002/bip.360210510.

引用本文的文献

1
Underestimated role of macromolecular crowding in bioengineered models of health and diseases.大分子拥挤效应在生物工程健康与疾病模型中被低估的作用。
Mater Today Bio. 2025 Apr 17;32:101772. doi: 10.1016/j.mtbio.2025.101772. eCollection 2025 Jun.
2
Experimentally Probing the Effect of Confinement Geometry on Lipid Diffusion.实验探究受限几何结构对脂质扩散的影响。
J Phys Chem B. 2024 May 9;128(18):4404-4413. doi: 10.1021/acs.jpcb.3c07388. Epub 2024 Apr 4.
3
Molecular Crowding: Physiologic Sensing and Control.分子拥挤:生理感知与调控
Annu Rev Physiol. 2024 Feb 12;86:429-452. doi: 10.1146/annurev-physiol-042222-025920. Epub 2023 Nov 6.
4
Unusual Aspects of Charge Regulation in Flexible Weak Polyelectrolytes.柔性弱聚电解质中电荷调节的异常方面。
Polymers (Basel). 2023 Jun 14;15(12):2680. doi: 10.3390/polym15122680.
5
Effects of External Perturbations on Protein Systems: A Microscopic View.外部扰动对蛋白质系统的影响:微观视角
ACS Omega. 2022 Nov 30;7(49):44556-44572. doi: 10.1021/acsomega.2c06199. eCollection 2022 Dec 13.
6
Cell-size space effects on phase separation of binary polymer blends.细胞大小空间对二元聚合物共混物相分离的影响。
Biophys Rev. 2022 Oct 25;14(5):1093-1103. doi: 10.1007/s12551-022-01001-0. eCollection 2022 Oct.
7
Partitioning of ribonucleoprotein complexes from the cellular actin cortex.核糖核蛋白复合物从细胞肌动蛋白皮层的分离。
Sci Adv. 2022 Aug 19;8(33):eabj3236. doi: 10.1126/sciadv.abj3236.
8
Competitive binding and molecular crowding regulate the cytoplasmic interactome of non-viral polymeric gene delivery vectors.竞争性结合和分子拥挤调节非病毒聚合物基因传递载体的细胞质相互作用组。
Nat Commun. 2021 Nov 8;12(1):6445. doi: 10.1038/s41467-021-26695-w.
9
Stability of proteins encapsulated in Michael-type addition polyethylene glycol hydrogels.包埋在迈克尔加成型聚乙二醇水凝胶中的蛋白质的稳定性。
Biotechnol Bioeng. 2021 Dec;118(12):4840-4853. doi: 10.1002/bit.27949. Epub 2021 Oct 11.
10
Functional compartmentalization of photoreceptor neurons.感光神经元的功能区隔化。
Pflugers Arch. 2021 Sep;473(9):1493-1516. doi: 10.1007/s00424-021-02558-7. Epub 2021 Apr 20.

本文引用的文献

1
The effect of volume occupancy upon the thermodynamic activity of proteins: some biochemical consequences.体积占有率对蛋白质热力学活性的影响:一些生化后果。
Mol Cell Biochem. 1983;55(2):119-40. doi: 10.1007/BF00673707.
2
Diffusion of a small molecule in the cytoplasm of mammalian cells.小分子在哺乳动物细胞质中的扩散。
Proc Natl Acad Sci U S A. 1984 Jun;81(11):3414-8. doi: 10.1073/pnas.81.11.3414.
3
The cytoplasmic matrix: its volume and surface area and the diffusion of molecules through it.细胞质基质:其体积、表面积以及分子在其中的扩散。
Proc Natl Acad Sci U S A. 1985 Aug;82(15):5030-4. doi: 10.1073/pnas.82.15.5030.
4
Hindered diffusion of inert tracer particles in the cytoplasm of mouse 3T3 cells.惰性示踪粒子在小鼠3T3细胞质中的扩散受阻。
Proc Natl Acad Sci U S A. 1987 Jul;84(14):4910-3. doi: 10.1073/pnas.84.14.4910.
5
Indefinite isoenthalpic self-association of solute molecules.溶质分子的不确定等焓自缔合。
Biophys Chem. 1987 Nov;28(2):121-8. doi: 10.1016/0301-4622(87)80081-9.