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位点特异性补骨脂素修饰的DNA寡核苷酸的合成与结构测定的最新进展。

Recent advances in the synthesis and structure determination of site specifically psoralen-modified DNA oligonucleotides.

作者信息

Sastry S S, Spielmann H P, Dwyer T J, Wemmer D E, Hearst J E

机构信息

Department of Chemistry, University of California, Berkeley.

出版信息

J Photochem Photobiol B. 1992 Jun 30;14(1-2):65-79. doi: 10.1016/1011-1344(92)85083-7.

DOI:10.1016/1011-1344(92)85083-7
PMID:1432385
Abstract

We have developed novel methods for the preparation of multimicromole quantities of extremely pure, uniquely photoadducted psoralen-DNA cross-links, furan-side monoadducted DNA and pyrone-side monoadducts. Psoralen cross-linked and furan-side monoadducted DNA were produced by employing high intensity argon ion and krypton ion lasers as light sources. Pyrone-side monoadducts were prepared by base-catalyzed photoreversal of psoralen cross-links. The various psoralen-adducted DNA oligomers were efficiently purified by high performance liquid chromatography. These methods have permitted us to synthesize 4 mumol each of a self-complementary 8-mer d(GCGTACGC) 4'-(hydroxymethyl)-4,5',8-trimethylpsoralen (HMT) furan-side monoadduct and HMT cross-link. Preliminary nuclear magnetic resonance (NMR) data on the HMT cross-linked 8-mer d(GCGTACGC) have been obtained which confirmed the presence of the diadducted psoralen at the unique 5'TpA3' site. NMR data obtained from the 8-mer furan-side monoadduct revealed that the psoralen molecule is intercalated into the DNA double helix. Preliminary crystals of 8-mer cross-linked DNA molecule have been grown. Conditions for the growth of X-ray diffraction-quality crystals and the further analysis of these crystals are now in progress.

摘要

我们已经开发出了新方法,可制备多微摩尔量的极其纯净、具有独特光加合作用的补骨脂素 - DNA交联物、呋喃侧单加合DNA和吡喃酮侧单加合物。补骨脂素交联的和呋喃侧单加合的DNA是通过使用高强度氩离子激光和氪离子激光作为光源产生的。吡喃酮侧单加合物是通过补骨脂素交联物的碱催化光逆转制备的。各种补骨脂素加合的DNA寡聚物通过高效液相色谱法得到了有效纯化。这些方法使我们能够合成4 μmol的自互补8聚体d(GCGTACGC) 4'-(羟甲基)-4,5',8-三甲基补骨脂素(HMT)呋喃侧单加合物和HMT交联物各4 μmol。已获得关于HMT交联的8聚体d(GCGTACGC)的初步核磁共振(NMR)数据,证实了在独特的5'TpA3'位点存在双加合补骨脂素。从8聚体呋喃侧单加合物获得的NMR数据表明补骨脂素分子插入到了DNA双螺旋中。已培养出8聚体交联DNA分子的初步晶体。目前正在进行用于生长X射线衍射质量晶体的条件以及对这些晶体的进一步分析。

相似文献

1
Recent advances in the synthesis and structure determination of site specifically psoralen-modified DNA oligonucleotides.位点特异性补骨脂素修饰的DNA寡核苷酸的合成与结构测定的最新进展。
J Photochem Photobiol B. 1992 Jun 30;14(1-2):65-79. doi: 10.1016/1011-1344(92)85083-7.
2
Methods for the large-scale synthesis of psoralen furan-side monoadducts and diadducts.补骨脂素呋喃侧单加合物和双加合物的大规模合成方法。
Proc Natl Acad Sci U S A. 1992 May 15;89(10):4514-8. doi: 10.1073/pnas.89.10.4514.
3
Wavelength dependence for the photoreactions of DNA-psoralen monoadducts. 1. Photoreversal of monoadducts.DNA-补骨脂素单加合物光反应的波长依赖性。1. 单加合物的光逆转。
Biochemistry. 1987 Jun 30;26(13):3786-92. doi: 10.1021/bi00387a008.
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Wavelength dependence for the photoreactions of DNA-psoralen monoadducts. 2. Photo-cross-linking of monoadducts.DNA-补骨脂素单加合物光反应的波长依赖性。2. 单加合物的光交联
Biochemistry. 1987 Jun 30;26(13):3792-8. doi: 10.1021/bi00387a009.
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Laser-induced protein-DNA cross-links via psoralen furanside monoadducts.通过补骨脂呋喃糖苷单加合物形成的激光诱导蛋白质 - DNA交联。
Biochemistry. 1993 Jun 1;32(21):5526-38. doi: 10.1021/bi00072a006.
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Thermostability of double-stranded deoxyribonucleic acids: effects of covalent additions of a psoralen.双链脱氧核糖核酸的热稳定性:补骨脂素共价加成的影响
Biochemistry. 1986 Oct 7;25(20):5895-902. doi: 10.1021/bi00368a009.
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Human endonucleolytic incision of DNA 3' and 5' to a site-directed psoralen monoadduct and interstrand cross-link.人源DNA在定点补骨脂素单加合物和链间交联位点3'和5'处的核酸内切切割。
J Biol Chem. 1995 Dec 22;270(51):30709-16. doi: 10.1074/jbc.270.51.30709.
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DNA structural reorganization upon conversion of a psoralen furan-side monoadduct to an interstrand cross-link: implications for DNA repair.补骨脂素呋喃侧单加合物转化为链间交联时的DNA结构重组:对DNA修复的影响
Proc Natl Acad Sci U S A. 1995 Mar 14;92(6):2345-9. doi: 10.1073/pnas.92.6.2345.
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Base-catalyzed reversal of a psoralen-DNA cross-link.补骨脂素 - DNA交联的碱催化逆转
Biochemistry. 1988 Jul 12;27(14):5174-8. doi: 10.1021/bi00414a034.
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Wavelength dependence for the photoreversal of a psoralen-DNA cross-link.补骨脂素 - DNA交联光逆转的波长依赖性
Biochemistry. 1986 May 20;25(10):3013-20. doi: 10.1021/bi00358a042.

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