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补骨脂素 - DNA交联光逆转的波长依赖性

Wavelength dependence for the photoreversal of a psoralen-DNA cross-link.

作者信息

Cimino G D, Shi Y B, Hearst J E

出版信息

Biochemistry. 1986 May 20;25(10):3013-20. doi: 10.1021/bi00358a042.

Abstract

We report an action spectrum for the photoreversal of a psoralen cross-link joining two self-complementary DNA oligonucleotides. The cross-link was formed between two thymines (T) on opposite strands of the DNA oligomers and 4'-(hydroxymethyl)-4,5',8-trimethylpsoralen (HMT). For comparison, we also present an action spectrum for the photoreversal of the isolated diadduct T-HMT-T. The wavelength dependence for the diadduct photoreversal parallels its absorption spectrum. Both the diadduct and the cross-linked DNA can be photoreversed by exposure to light with wavelengths between 240 and 313 nm. We did not observe photoreversal at 334 nm or above. At least two distinct absorption bands appear to contribute to photoreversal. We measured a quantum yield of 0.16 for photoreversal of the isolated diadduct at wavelengths between 240 and 266 nm. For wavelengths above 280 nm, the quantum yield is 0.30. We also observed a preferential photoreversal at the furan end of the psoralen in the T-HMT-T diadduct. In contrast, the cross-linked DNA oligonucleotides preferentially photoreversed at the pyrone end of the psoralen adduct. The rate constant for photoreversal of the cross-linked DNA is larger than that for the isolated diadduct at wavelengths below 300 nm.

摘要

我们报道了一种补骨脂素交联连接两个自互补DNA寡核苷酸的光逆转作用光谱。该交联是在DNA寡聚物相反链上的两个胸腺嘧啶(T)与4'-(羟甲基)-4,5',8-三甲基补骨脂素(HMT)之间形成的。为作比较,我们还给出了分离的二元加合物T-HMT-T光逆转的作用光谱。二元加合物光逆转的波长依赖性与其吸收光谱相似。二元加合物和交联的DNA通过暴露于波长在240至313nm之间的光均可发生光逆转。我们在334nm及以上未观察到光逆转。至少有两个不同的吸收带似乎对光逆转有作用。我们测得分离的二元加合物在240至266nm波长之间光逆转的量子产率为0.16。对于波长在280nm以上,量子产率为0.30。我们还观察到T-HMT-T二元加合物中补骨脂素的呋喃端优先发生光逆转。相比之下,交联的DNA寡核苷酸在补骨脂素加合物的吡喃端优先发生光逆转。在波长低于300nm时,交联DNA光逆转的速率常数大于分离的二元加合物的速率常数。

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