Walker D, Chia W N, Muirhead H
Department of Biochemistry, School of Medical Sciences, Bristol, U.K.
J Mol Biol. 1992 Nov 5;228(1):265-76. doi: 10.1016/0022-2836(92)90505-e.
The structural gene for pyruvate kinase from Bacillus stearothermophilus has been cloned in Escherichia coli and sequenced. The open reading frame from the ATG start codon to the TAG stop codon is 1482 base-pairs and encodes a peptide of relative molecular mass 52,967. In the expression vector pKK223-3, containing the synthetic tac promoter, the gene is overexpressed in E. coli cells to an estimated level of 30% total soluble cell protein. A purification procedure for the overexpressed protein has been established. The construction and characterization of a pair of mutant proteins has given insight into the structural basis of allosteric regulation in the tetrameric enzyme. Substituting tryptophan for tyrosine at position 466 (mutant Trp466-->Tyr) resulted in an activated form of the enzyme, having a reduced K1/2 for the substrate phosphoenolpyruvate. We propose that the characteristics of this mutant might be the result of bulk removal releasing steric inhibition to the formation of an interdomain salt bridge between Asp356 and Arg444. The regulatory behaviour of the double mutant produced by making the additional substitution aspartate for glutamate at position 356 (Trp466-->Tyr/Asp356-->Glu) corroborates this. The position of the salt bridge is such that it might be pivotal to the conformation of a pocket that is proposed to open up when the active R-conformation is adopted. We suggest that the mechanism of activation of B. stearothermophilus pyruvate kinase by ribose-5-phosphate might hinge on an interaction with, or indirectly through, residue Trp466, removing it from the vicinity of the potential salt bridge between Asp356 and Arg444 and thus effecting a closing together of the protein structure concomitant with an opening up of the pocket region.
嗜热脂肪芽孢杆菌丙酮酸激酶的结构基因已在大肠杆菌中克隆并测序。从ATG起始密码子到TAG终止密码子的开放阅读框为1482个碱基对,编码一个相对分子质量为52967的肽。在含有合成tac启动子的表达载体pKK223 - 3中,该基因在大肠杆菌细胞中过量表达,估计水平达到总可溶性细胞蛋白的30%。已建立了过量表达蛋白的纯化程序。一对突变蛋白的构建和表征为四聚体酶变构调节的结构基础提供了深入了解。在第466位用色氨酸替代酪氨酸(突变体Trp466→Tyr)产生了该酶的活化形式,其对底物磷酸烯醇丙酮酸的K1/2降低。我们提出,该突变体的特性可能是由于大量去除释放了对Asp356和Arg444之间域间盐桥形成的空间抑制。通过在第356位用天冬氨酸替代谷氨酸(Trp466→Tyr/Asp356→Glu)产生的双突变体的调节行为证实了这一点。盐桥的位置使其可能对一个口袋的构象至关重要,当采用活性R构象时,该口袋被认为会打开。我们认为,5 - 磷酸核糖对嗜热脂肪芽孢杆菌丙酮酸激酶的激活机制可能取决于与Trp466残基的相互作用,或通过该残基间接相互作用,将其从Asp356和Arg444之间潜在盐桥的附近移除,从而导致蛋白质结构的闭合以及口袋区域的打开。