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钙离子释放的随机着火-扩散-着火模型中的火花与波

Sparks and waves in a stochastic fire-diffuse-fire model of Ca2+ release.

作者信息

Coombes S, Timofeeva Y

机构信息

Department of Mathematical Sciences, Loughborough University, Leicestershire, LE11 3TU, United Kingdom.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Aug;68(2 Pt 1):021915. doi: 10.1103/PhysRevE.68.021915. Epub 2003 Aug 25.

Abstract

Calcium ions are an important second messenger in living cells. Indeed, calcium signals in the form of waves have been the subject of much recent experimental interest. It is now well established that these waves are composed of elementary stochastic release events (calcium puffs or sparks) from spatially localized calcium stores. Here we develop a computationally inexpensive model of calcium release, based upon a stochastic generalization of the fire-diffuse-fire threshold model. Our model retains the discrete nature of calcium stores, but also incorporates a notion of release probability via the introduction of threshold noise. Numerical simulations of the model illustrate that stochastic calcium release leads to the spontaneous production of calcium sparks that may merge to form saltatory waves. In the parameter regime where deterministic waves exist, it is possible to identify a critical level of noise, defining a nonequilibrium phase transition between propagating and abortive structures. A statistical analysis shows that this transition is the same as for models in the directed percolation universality class. Moreover, in the regime where no initial structure can survive deterministically, threshold noise is shown to generate a form of array enhanced coherence resonance, whereby all calcium stores release periodically and simultaneously.

摘要

钙离子是活细胞中重要的第二信使。事实上,以波的形式存在的钙信号是近期许多实验关注的主题。现在已经明确,这些波由来自空间局部钙库的基本随机释放事件(钙瞬变或钙火花)组成。在此,我们基于扩散-激发-扩散阈值模型的随机推广,开发了一个计算成本较低的钙释放模型。我们的模型保留了钙库的离散性质,但也通过引入阈值噪声纳入了释放概率的概念。该模型的数值模拟表明,随机钙释放会导致钙火花的自发产生,这些钙火花可能合并形成跳跃波。在存在确定性波的参数范围内,可以确定一个临界噪声水平,定义传播结构和夭折结构之间的非平衡相变。统计分析表明,这种转变与有向渗流普适类模型的转变相同。此外,在没有初始结构能够确定性存活的情况下,阈值噪声会产生一种阵列增强相干共振形式,即所有钙库都会周期性地同时释放。

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