Kim Eunkyung, Kim Kyuwon, Yang Haesik, Kim Youn Tae, Kwak Juhyoun
Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 305-701, Republic of Korea.
Anal Chem. 2003 Nov 1;75(21):5665-72. doi: 10.1021/ac034253x.
We have developed a sandwich-type enzyme-linked DNA sensor as a new electrochemical method to detect DNA hybridization. A partially ferrocenyl-tethered poly(amidoamine) dendrimer (Fc-D) was used as an electrocatalyst to enhance the electronic signals of DNA detection as well as a building block to immobilize capture probes. Fc-D was immobilized on a carboxylic acid-terminated self-assembled monolayer (SAM) by covalent coupling of unreacted amine in Fc-D to the acid. Thiolated capture probe was attached to the remaining amine groups of Fc-D on the SAM via a bifunctional linker. The target DNA was hybridized with the capture probe, and an extension in the DNA of the target was then hybridized with a biotinylated detection probe. Avidin-conjugated alkaline phosphatase was bound to the detection probe and allowed to generate the electroactive label, p-aminophenol, from p-aminophenyl phosphate enzymatically. p-Aminophenol diffuses into the Fc-D layer and is then electrocatalytically oxidized by the electronic mediation of the immobilized Fc-D, which leads to a great enhancement in signal. Consequently, the amount of hybridized target can be estimated using the intensity of electrocatalytic current. This DNA sensor exhibits a detection limit of 20 fmol. Our method was also successfully applied to the sequence-selective discrimination between perfectly matched and single-base mismatched target oligonucleotides.
我们开发了一种夹心型酶联DNA传感器,作为检测DNA杂交的新型电化学方法。一种部分连接二茂铁的聚(酰胺胺)树枝状大分子(Fc-D)被用作电催化剂,以增强DNA检测的电子信号,同时作为固定捕获探针的构建模块。通过将Fc-D中未反应的胺与酸共价偶联,将Fc-D固定在羧酸封端的自组装单层(SAM)上。硫醇化捕获探针通过双功能接头连接到SAM上Fc-D的剩余胺基上。靶DNA与捕获探针杂交,然后靶DNA的延伸部分与生物素化检测探针杂交。抗生物素蛋白偶联的碱性磷酸酶与检测探针结合,并通过酶促作用从对氨基苯磷酸生成电活性标记物对氨基苯酚。对氨基苯酚扩散到Fc-D层中,然后通过固定化Fc-D的电子介导进行电催化氧化,这导致信号大幅增强。因此,可以使用电催化电流强度来估计杂交靶标的量。这种DNA传感器的检测限为20 fmol。我们的方法还成功应用于完全匹配和单碱基错配靶标寡核苷酸之间的序列选择性区分。