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细菌表面层蛋白SbsB及其两个不同功能域的生物物理特性

Biophysical characterization of the entire bacterial surface layer protein SbsB and its two distinct functional domains.

作者信息

Rünzler Dominik, Huber Carina, Moll Dieter, Köhler Gottfried, Sára Margit

机构信息

Institute for Theoretical Chemistry and Structural Biology, University of Vienna, Campus Vienna Biocenter 6/1, Vienna 1030, Austria.

出版信息

J Biol Chem. 2004 Feb 13;279(7):5207-15. doi: 10.1074/jbc.M308819200. Epub 2003 Nov 17.

Abstract

The crystalline bacterial cell surface layer (S-layer) protein SbsB of Geobacillus stearothermophilus PV72/p2 was dissected into an N-terminal part defined by the three consecutive S-layer homologous motifs and the remaining large C-terminal part. Both parts of the mature protein were produced as separate recombinant proteins (rSbsB(1-178) and rSbsB(177-889)) and compared with the full-length form rSbsB(1-889) (rSbsB). Evidence for functional and structural integrity of the two truncated forms was provided by optical spectroscopic methods and electron microscopy. In particular, binding of the secondary cell wall polymer revealed a high affinity dissociation constant of 3 nm and could be assigned solely to the soluble rSbsB(1-178), whereas rSbsB(177-889) self-assembled into the same lattice as the full-length protein. Furthermore, thermal as well as guanidinium hydrochloride induced equilibrium unfolding profiles monitored by intrinsic fluorescence, and circular dichroism spectroscopy allowed characterization of rSbsB(1-178) as an alpha-helical protein with a single cooperative unfolding transition yielding a DeltaG value of 26.5 kJ mol(-1). The C-terminal rSbsB(177-889) could be characterized as a beta-sheet protein with typical multidomain unfolding, which is partially less stable as stand-alone protein. In general, the truncated forms showed identical properties compared with the full-length rSbsB with respect to structure and function. Consequently, rSbsB is characterized by its two functionally and structurally separated parts, the specific secondary cell wall polymer binding rSbsB(1-178) and the larger rSbsB(177-889) responsible for formation of the crystalline array.

摘要

嗜热栖热放线菌PV72/p2的结晶细菌细胞表面层(S层)蛋白SbsB被分解为一个由三个连续的S层同源基序定义的N端部分和其余的大C端部分。成熟蛋白的这两个部分都作为单独的重组蛋白(rSbsB(1-178)和rSbsB(177-889))产生,并与全长形式rSbsB(1-889)(rSbsB)进行比较。通过光谱学方法和电子显微镜提供了两种截短形式的功能和结构完整性的证据。特别是,次生细胞壁聚合物的结合显示出3纳米的高亲和力解离常数,并且可以仅归因于可溶性rSbsB(1-178),而rSbsB(177-889)自组装成与全长蛋白相同的晶格。此外,通过内在荧光监测的热以及盐酸胍诱导的平衡解折叠谱,以及圆二色光谱允许将rSbsB(1-178)表征为具有单个协同解折叠转变的α-螺旋蛋白,产生的ΔG值为26.5 kJ mol(-1)。C端rSbsB(177-889)可以表征为具有典型多结构域解折叠的β-折叠蛋白,作为单独的蛋白其部分稳定性较低。一般来说,与全长rSbsB相比,截短形式在结构和功能方面表现出相同的特性。因此,rSbsB的特征在于其两个功能和结构上分离的部分,即特异性结合次生细胞壁聚合物的rSbsB(1-178)和负责形成晶体阵列的较大的rSbsB(177-889)。

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