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基于核糖体RNA基因序列推断的后圆线虫总科(线虫纲:圆线目)系统发育分析

Phylogenetic analysis of the Metastrongyloidea (Nematoda: Strongylida) inferred from ribosomal RNA gene sequences.

作者信息

Carreno Ramon A, Nadler Steven A

机构信息

Department of Nematology, University of California-Davis, Davis, California 95616, USA.

出版信息

J Parasitol. 2003 Oct;89(5):965-73. doi: 10.1645/GE-76R.

Abstract

Phylogenetic relationships among nematodes of the strongylid superfamily Metastrongyloidea were analyzed using partial sequences from the large-subunit ribosomal RNA (LSU rRNA) and small-subunit ribosomal RNA (SSU rRNA) genes. Regions of nuclear ribosomal DNA (rDNA) were amplified by polymerase chain reaction, directly sequenced, aligned, and phylogenies inferred using maximum parsimony. Phylogenetic hypotheses inferred from the SSU rRNA gene supported the monophyly of representative taxa from each of the 7 currently accepted metastrongyloid families. Metastrongyloid taxa formed the sister group to representative trichostrongyloid sequences based on SSU data. Sequences from either the SSU or LSU RNA regions alone provided poor resolution for relationships within the Metastrongyloidea. However, a combined analysis using sequences from all rDNA regions yielded 3 equally parsimonious trees that represented the abursate Filaroididae as polyphyletic, Parafilaroides decorus as the sister species to the monophyletic Pseudaliidae, and a sister group relationship between Oslerus osleri and Metastrongylus salmi. Relationships among 3 members of the Crenosomatidae, and 1 representative of the Skrjabingylidae (Skrjabingylus chitwoodorum) were not resolved by these combined data. However, members of both these groups were consistently resolved as the sister group to the other metastrongyloid families. These relationships are inconsistent with traditional classifications of the Metastrongyloidea and existing hypotheses for their evolution.

摘要

利用大亚基核糖体RNA(LSU rRNA)和小亚基核糖体RNA(SSU rRNA)基因的部分序列,分析了后圆线虫超科圆线亚目的线虫之间的系统发育关系。通过聚合酶链反应扩增核糖体DNA(rDNA)区域,直接测序、比对,并使用最大简约法推断系统发育。从SSU rRNA基因推断出的系统发育假说支持了目前已被接受的7个后圆线虫科中每个科的代表性分类单元的单系性。基于SSU数据,后圆线虫分类单元形成了代表性毛圆线虫序列的姐妹群。单独使用SSU或LSU RNA区域的序列对后圆线虫科内的关系提供的分辨率较差。然而,使用所有rDNA区域的序列进行的联合分析产生了3个同样简约的树,这些树表明具囊丝虫科是多系的,饰变副丝虫是单系假丝虫科的姐妹种,以及奥氏后圆线虫和萨氏后圆线虫之间存在姐妹群关系。这些联合数据未能解决硬壳圆线虫科的3个成员与斯氏并殖圆线虫科的1个代表(奇氏斯氏并殖圆线虫)之间的关系。然而,这两个类群的成员始终被确定为其他后圆线虫科的姐妹群。这些关系与后圆线虫超科的传统分类及其进化的现有假说不一致。

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