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天冬氨酸转氨甲酰酶催化亚基的核磁共振氢谱研究。

1H NMR studies on the catalytic subunit of aspartate transcarbamoylase.

作者信息

Cohen R E, Takama M, Schachman H K

机构信息

Department of Molecular and Cell Biology, University of California, Berkeley 94720.

出版信息

Proc Natl Acad Sci U S A. 1992 Dec 15;89(24):11881-5. doi: 10.1073/pnas.89.24.11881.

Abstract

The 1H NMR spectrum of the catalytic subunit of Escherichia coli aspartate transcarbamoylase (EC 2.1.3.2) was simplified by using strains auxotrophic for the aromatic amino acids and a growth medium containing fully deuterated Trp, Phe, and His and partially deuterated Tyr. 1H resonances for Tyr in the catalytic trimer (M(r) = 10(5)) were partially resolved into five peaks at 27 degrees C, which above 50 degrees C were further resolved to give a distinct resonance for each of the eight Tyr residues in the polypeptide chain. Experiments on chemically modified catalytic subunits and on a mutant form in which Tyr-165 was converted to Ser-165 led to the assignment of resonances for Tyr-165, Tyr-240, and Tyr-185. Binding of the substrate, carbamoyl phosphate, caused shifts of two of the unassigned resonances, and the subsequent binding of the aspartate analog succinate perturbed the resonances corresponding to Tyr-165 and Tyr-240. The bisubstrate analog N-(phosphonacetyl)-L-aspartate produced a spectrum differing considerably from that caused by the combination of carbamoyl phosphate and succinate. The NMR spectrum for the Tyr-165-->Ser mutant trimer showed clearly that the single amino acid substitution caused conformational changes affecting the environment of residues remote from the position of the replacement. In contrast, the inactive mutant subunit in which Gly-128 was replaced by Asp exhibited a spectrum virtually identical to that of the wild-type protein. However, addition of the substrate carbamoyl phosphate caused a marked change in the spectrum of the mutant enzyme, whereas that of the wild-type trimer was altered only slightly, showing that the effect of the amino acid substitution was manifested in the NMR spectrum only with the liganded enzyme.

摘要

通过使用对芳香族氨基酸营养缺陷型的菌株以及含有完全氘代的色氨酸、苯丙氨酸和组氨酸和部分氘代酪氨酸的生长培养基,简化了大肠杆菌天冬氨酸转氨甲酰酶(EC 2.1.3.2)催化亚基的1H NMR谱。催化三聚体(M(r)=10(5))中酪氨酸的1H共振在27℃时部分解析为五个峰,在50℃以上进一步解析,从而为多肽链中的八个酪氨酸残基各自给出一个清晰的共振峰。对化学修饰的催化亚基以及酪氨酸-165被转化为丝氨酸-165的突变形式进行的实验,导致了酪氨酸-165、酪氨酸-240和酪氨酸-185共振峰的归属。底物氨甲酰磷酸的结合导致两个未归属共振峰发生位移,随后天冬氨酸类似物琥珀酸的结合扰乱了对应于酪氨酸-165和酪氨酸-240的共振峰。双底物类似物N-(膦酰乙酰基)-L-天冬氨酸产生的光谱与氨甲酰磷酸和琥珀酸组合产生的光谱有很大不同。酪氨酸-165→丝氨酸突变三聚体的NMR谱清楚地表明,单个氨基酸取代引起了构象变化,影响了远离取代位置的残基环境。相比之下,甘氨酸-128被天冬氨酸取代的无活性突变亚基的光谱与野生型蛋白质的光谱几乎相同。然而,添加底物氨甲酰磷酸导致突变酶的光谱发生显著变化,而野生型三聚体的光谱仅略有改变,表明氨基酸取代的影响仅在结合配体的酶的NMR谱中体现出来。

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