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泽伐米星IIB的生物合成均匀13C、15N标记。13C和15N NMR全归属

Biosynthetic uniform 13C,15N-labelling of zervamicin IIB. Complete 13C and 15N NMR assignment.

作者信息

Ovchinnikova Tatyana V, Shenkarev Zakhar O, Yakimenko Zoya A, Svishcheva Natalia V, Tagaev Andrey A, Skladnev Dmitry A, Arseniev Alexander S

机构信息

Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia.

出版信息

J Pept Sci. 2003 Nov-Dec;9(11-12):817-26. doi: 10.1002/psc.499.

Abstract

Zervamicin IIB is a member of the alpha-aminoisobutyric acid containing peptaibol antibiotics. A new procedure for the biosynthetic preparation of the uniformly 13C- and 15N-enriched peptaibol is described This compound was isolated from the biomass of the fungus-producer Emericellopsis salmosynnemata strain 336 IMI 58330 obtained upon cultivation in the totally 13C, 15N-labelled complete medium. To prepare such a medium the autolysed biomass and the exopolysaccharides of the obligate methylotrophic bacterium Methylobacillus flagellatus KT were used. This microorganism was grown in totally 13C, 15N-labelled minimal medium containing 13C-methanol and 15N-ammonium chloride as the only carbon and nitrogen sources. Preliminary NMR spectroscopic analysis indicated a high extent of isotope incorporation (> 90%) and led to the complete 13C- and 15N-NMR assignment including the stereospecific assignment of Aib residues methyl groups. The observed pattern of the structurally important secondary chemical shifts of 1H(alpha), 13C=O and 13C(alpha) agrees well with the previously determined structure of zervamicin IIB in methanol solution.

摘要

泽尔瓦霉素IIB是含α-氨基异丁酸的肽菌素类抗生素的一员。本文描述了一种生物合成制备均匀富集13C和15N的肽菌素的新方法。该化合物是从在完全用13C、15N标记的完全培养基中培养得到的真菌产生菌鲑鱼拟青霉336 IMI 58330的生物质中分离出来的。为制备这样一种培养基,使用了专性甲基营养型细菌鞭毛甲基芽孢杆菌KT的自溶生物质和胞外多糖。该微生物在完全用13C、15N标记的基本培养基中生长,该培养基含有13C-甲醇和15N-氯化铵作为唯一的碳源和氮源。初步的核磁共振光谱分析表明同位素掺入程度很高(>90%),并完成了13C和15N核磁共振归属,包括Aib残基甲基的立体专一性归属。观察到的1H(α)、13C=O和13C(α)等结构重要二级化学位移模式与先前在甲醇溶液中确定的泽尔瓦霉素IIB结构非常吻合。

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