Suppr超能文献

基因表达图谱网站(GenePaint.org):小鼠胚胎基因表达模式图谱。

GenePaint.org: an atlas of gene expression patterns in the mouse embryo.

作者信息

Visel Axel, Thaller Christina, Eichele Gregor

机构信息

Max Planck Institute of Experimental Endocrinology, Feodor-Lynen-Strasse 7, D-30625 Hannover, Germany.

出版信息

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6. doi: 10.1093/nar/gkh029.

Abstract

High-throughput instruments were recently developed to determine gene expression patterns on tissue sections by RNA in situ hybridization. The resulting images of gene expression patterns, chiefly of E14.5 mouse embryos, are accessible to the public at http://www.genepaint.org. This relational database is searchable for gene identifiers and RNA probe sequences. Moreover, patterns and intensity of expression in approximately 100 different embryonic tissues are annotated and can be searched using a standardized catalog of anatomical structures. A virtual microscope tool, the Zoom Image Server, was implemented in GenePaint.org and permits interactive zooming and panning across approximately 15,000 high-resolution images.

相似文献

1
GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6. doi: 10.1093/nar/gkh029.
2
BlotBase: a northern blot database.
Gene. 2008 Dec 31;427(1-2):47-50. doi: 10.1016/j.gene.2008.08.026. Epub 2008 Sep 18.
3
Large-scale whole mount in situ hybridization of mouse embryos.
Methods Mol Biol. 2009;577:167-79. doi: 10.1007/978-1-60761-232-2_13.
4
Developmental mouse brain gene expression maps.
J Physiol. 2006 Sep 1;575(Pt 2):343-6. doi: 10.1113/jphysiol.2006.112607. Epub 2006 May 25.
6
The Mouse SAGE Site: database of public mouse SAGE libraries.
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D482-3. doi: 10.1093/nar/gkh058.
8
GEISHA: an in situ hybridization gene expression resource for the chicken embryo.
Cytogenet Genome Res. 2007;117(1-4):30-5. doi: 10.1159/000103162.
9
Data integration for spatio-temporal patterns of gene expression of zebrafish development: the GEMS database.
J Integr Bioinform. 2008 Aug 25;5(2):92. doi: 10.2390/biecoll-jib-2008-92.
10
Detection of gene expression in mouse embryos and tissue sections.
Methods Mol Biol. 2011;770:259-92. doi: 10.1007/978-1-61779-210-6_10.

引用本文的文献

1
N2A, MCF7, and HepG2 Cells Support Intracellular Replication of .
MicroPubl Biol. 2025 Aug 13;2025. doi: 10.17912/micropub.biology.001716. eCollection 2025.
3
A molecular circuit regulates fate plasticity in emerging and adult AT2 cells.
bioRxiv. 2025 May 7:2025.04.28.650846. doi: 10.1101/2025.04.28.650846.
5
Aspartate in the Brain: A Review.
Neurochem Res. 2025 Jun 12;50(3):199. doi: 10.1007/s11064-025-04454-3.
6
IFITM2 Modulates Endocytosis Maintaining Neural Stem Cells in Developing Neocortex.
Adv Sci (Weinh). 2025 May;12(17):e2501593. doi: 10.1002/advs.202501593. Epub 2025 Mar 7.
8
Repurposing of a gill gene regulatory program for outer-ear evolution.
Nature. 2025 Mar;639(8055):682-690. doi: 10.1038/s41586-024-08577-5. Epub 2025 Jan 9.
9
Orthologs of and impact sleep in mice.
Sleep Adv. 2024 Dec 12;5(1):zpae092. doi: 10.1093/sleepadvances/zpae092. eCollection 2024.
10
MicroRNA-495 Modulates Neuronal Layer Fate Determination by Targeting .
Int J Biol Sci. 2024 Nov 11;20(15):6207-6221. doi: 10.7150/ijbs.94739. eCollection 2024.

本文引用的文献

1
Single-cell transcriptional analysis of neuronal progenitors.
Neuron. 2003 Apr 24;38(2):161-75. doi: 10.1016/s0896-6273(03)00229-0.
2
MGD: the Mouse Genome Database.
Nucleic Acids Res. 2003 Jan 1;31(1):193-5. doi: 10.1093/nar/gkg047.
4
Initial sequencing and comparative analysis of the mouse genome.
Nature. 2002 Dec 5;420(6915):520-62. doi: 10.1038/nature01262.
5
A transcriptome atlas of the mouse brain at cellular resolution.
Curr Opin Neurobiol. 2002 Oct;12(5):562-5. doi: 10.1016/s0959-4388(02)00356-2.
6
DNA arrays and neurobiology--what's new and what's next?
Curr Opin Neurobiol. 2002 Oct;12(5):554-61. doi: 10.1016/s0959-4388(02)00353-7.
8
Development of high-throughput tools to unravel the complexity of gene expression patterns in the mammalian brain.
Novartis Found Symp. 2001;239:129-46; discussion 146-59. doi: 10.1002/0470846674.ch11.
9
Initial sequencing and analysis of the human genome.
Nature. 2001 Feb 15;409(6822):860-921. doi: 10.1038/35057062.
10
The sequence of the human genome.
Science. 2001 Feb 16;291(5507):1304-51. doi: 10.1126/science.1058040.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验