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分类树揭示从不同天然乳清发酵剂培养物中分离出的瑞士乳杆菌菌株之间的生物多样性。

Biodiversity among Lactobacillus helveticus strains isolated from different natural whey starter cultures as revealed by classification trees.

作者信息

Gatti Monica, Trivisano Carlo, Fabrizi Enrico, Neviani Erasmo, Gardini Fausto

机构信息

Istituto Sperimentale Lattiero Caseario, 26900 Lodi, Italy.

出版信息

Appl Environ Microbiol. 2004 Jan;70(1):182-90. doi: 10.1128/AEM.70.1.182-190.2004.

Abstract

Lactobacillus helveticus is a homofermentative thermophilic lactic acid bacterium used extensively for manufacturing Swiss type and aged Italian cheese. In this study, the phenotypic and genotypic diversity of strains isolated from different natural dairy starter cultures used for Grana Padano, Parmigiano Reggiano, and Provolone cheeses was investigated by a classification tree technique. A data set was used that consists of 119 L. helveticus strains, each of which was studied for its physiological characters, as well as surface protein profiles and hybridization with a species-specific DNA probe. The methodology employed in this work allowed the strains to be grouped into terminal nodes without difficult and subjective interpretation. In particular, good discrimination was obtained between L. helveticus strains isolated, respectively, from Grana Padano and from Provolone natural whey starter cultures. The method used in this work allowed identification of the main characteristics that permit discrimination of biotypes. In order to understand what kind of genes could code for phenotypes of technological relevance, evidence that specific DNA sequences are present only in particular biotypes may be of great interest.

摘要

瑞士乳杆菌是一种同型发酵嗜热乳酸菌,广泛用于生产瑞士型和陈年意大利奶酪。在本研究中,通过分类树技术研究了从用于帕尔马干酪、帕尔马奶酪和普罗卧干酪的不同天然乳制品发酵剂培养物中分离出的菌株的表型和基因型多样性。使用了一个数据集,其中包含119株瑞士乳杆菌菌株,对每一株菌株都研究了其生理特征、表面蛋白谱以及与物种特异性DNA探针的杂交情况。本研究采用的方法能够将菌株轻松地分组到终端节点,无需进行困难且主观的解释。特别是,分别从帕尔马干酪和普罗卧干酪天然乳清发酵剂培养物中分离出的瑞士乳杆菌菌株之间获得了良好的区分。本研究中使用的方法能够识别出允许区分生物型的主要特征。为了了解哪种基因可能编码具有技术相关性的表型,特定DNA序列仅存在于特定生物型中的证据可能会非常有趣。

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