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TmCsp的高温溶液核磁共振结构

High-temperature solution NMR structure of TmCsp.

作者信息

Jung Astrid, Bamann Christian, Kremer Werner, Kalbitzer Hans Robert, Brunner Eike

机构信息

University of Regensburg, Institute of Biophysics and Physical Biochemistry, D-93040 Regensburg, Germany.

出版信息

Protein Sci. 2004 Feb;13(2):342-50. doi: 10.1110/ps.03281604.

Abstract

Cold shock proteins (Csps) are assumed to play a central role in the regulation of gene expression under cold shock conditions. Acting as single-stranded nucleic acid-binding proteins, they trigger the translation process and are therefore involved in the compensation of the influence of low temperatures (cold shock) upon the cell metabolism. However, it is unknown so far how Csps are switched on and off as a function of temperature. The aim of the present study is the study of possible structural changes responsible for this switching process. (1)H-(15)N HSQC spectra recorded at different temperatures and chemical-shift analysis have indicated subtle conformational changes for the cold-shock protein from the hyperthermophilic bacterium Thermotoga maritima (TmCsp) when the temperature is elevated from 303 K to its physiological temperature (343 K). The three-dimensional structure of TmCsp was determined by nuclear magnetic resonance (NMR) spectroscopy at 343 K to obtain quantitative information concerning these structural changes. By use of residual dipolar couplings, the loss of NOE information at high temperature could be compensated successfully. Most pronounced conformational changes compared with room-temperature conditions are observed for amino acid residues closely neighbored to two characteristic beta-bulges and a well-defined loop region of the protein. Because the residues shown to be responsible for the interaction of TmCsp with single-stranded nucleic acids can almost exclusively be found within these regions, nucleic acid-binding activity might be down-regulated with increasing temperature by the described conformational changes.

摘要

冷休克蛋白(Csps)被认为在冷休克条件下的基因表达调控中起核心作用。作为单链核酸结合蛋白,它们触发翻译过程,因此参与补偿低温(冷休克)对细胞代谢的影响。然而,迄今为止尚不清楚Csps如何随温度变化而开启和关闭。本研究的目的是研究导致这种转换过程的可能结构变化。在不同温度下记录的(1)H-(15)N HSQC谱以及化学位移分析表明,当温度从303 K升高到其生理温度(343 K)时,嗜热栖热菌(Thermotoga maritima,TmCsp)的冷休克蛋白发生了细微的构象变化。通过核磁共振(NMR)光谱在343 K下测定TmCsp的三维结构,以获取有关这些结构变化的定量信息。通过使用剩余偶极耦合,高温下NOE信息的损失可以得到成功补偿。与室温条件相比,在紧邻蛋白质的两个特征性β-凸起和一个明确的环区域的氨基酸残基处观察到最明显的构象变化。由于显示负责TmCsp与单链核酸相互作用的残基几乎完全位于这些区域内,因此随着温度升高,所述构象变化可能会下调核酸结合活性。

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High-temperature solution NMR structure of TmCsp.TmCsp的高温溶液核磁共振结构
Protein Sci. 2004 Feb;13(2):342-50. doi: 10.1110/ps.03281604.

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