Welker C, Böhm G, Schurig H, Jaenicke R
Institut für Biophysik und physikalische Biochemie, Universität Regensburg, Germany.
Protein Sci. 1999 Feb;8(2):394-403. doi: 10.1110/ps.8.2.394.
Thermotoga maritima (Tm) expresses a 7 kDa monomeric protein whose 18 N-terminal amino acids show 81% identity to N-terminal sequences of cold shock proteins (Csps) from Bacillus caldolyticus and Bacillus stearothermophilus. There were only trace amounts of the protein in Thermotoga cells grown at 80 degrees C. Therefore, to perform physicochemical experiments, the gene was cloned in Escherichia coli. A DNA probe was produced by PCR from genomic Tm DNA with degenerated primers developed from the known N-terminus of TmCsp and the known C-terminus of CspB from Bacillus subtilis. Southern blot analysis of genomic Tm DNA allowed to produce a partial gene library, which was used as a template for PCRs with gene- and vector-specific primers to identify the complete DNA sequence. As reported for other csp genes, the 5' untranslated region of the mRNA was anomalously long; it contained the putative Shine-Dalgarno sequence. The coding part of the gene contained 198 bp, i.e., 66 amino acids. The sequence showed 61% identity to CspB from B. caldolyticus and high similarity to all other known Csps. Computer-based homology modeling allowed the conclusion that TmCsp represents a beta-barrel similar to CspB from B. subtilis and CspA from E. coli. As indicated by spectroscopic analysis, analytical gel permeation chromatography, and mass spectrometry, overexpression of the recombinant protein yielded authentic TmCsp with a molecular weight of 7,474 Da. This was in agreement with the results of analytical ultracentrifugation confirming the monomeric state of the protein. The temperature-induced equilibrium transition at 87 degrees C exceeds the maximum growth temperature of Tm and represents the maximal Tm-value reported for Csps so far.
嗜热栖热菌(Tm)表达一种7 kDa的单体蛋白,其18个N端氨基酸与嗜热解硫杆菌和嗜热脂肪芽孢杆菌的冷休克蛋白(Csps)的N端序列有81%的同一性。在80摄氏度生长的嗜热栖热菌细胞中,该蛋白只有微量存在。因此,为了进行物理化学实验,该基因被克隆到大肠杆菌中。用从嗜热栖热菌冷休克蛋白(TmCsp)已知N端和枯草芽孢杆菌CspB已知C端设计的简并引物,通过PCR从嗜热栖热菌基因组DNA中制备了一个DNA探针。对嗜热栖热菌基因组DNA的Southern印迹分析使得构建了一个部分基因文库,该文库被用作PCR的模板,使用基因特异性引物和载体特异性引物来鉴定完整的DNA序列。正如其他csp基因所报道的那样,mRNA的5'非翻译区异常长;它包含假定的Shine-Dalgarno序列。该基因的编码部分包含198 bp,即66个氨基酸。该序列与嗜热解硫杆菌的CspB有61%的同一性,并且与所有其他已知的Csps有高度相似性。基于计算机的同源建模得出结论,TmCsp代表一种类似于枯草芽孢杆菌的CspB和大肠杆菌的CspA的β-桶结构。光谱分析、分析凝胶渗透色谱和质谱表明,重组蛋白的过表达产生了分子量为7474 Da的 authentic TmCsp。这与分析超速离心的结果一致,证实了该蛋白的单体状态。在87摄氏度的温度诱导平衡转变超过了嗜热栖热菌的最高生长温度,并且代表了迄今为止报道的Csps的最大Tm值。