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一种成簇易位模型或许可以解释Hox基因表达的共线性。

A cluster translocation model may explain the collinearity of Hox gene expressions.

作者信息

Papageorgiou Spyros

机构信息

Institute of Biology, NRC Demokritos Aghia Paraskevi Attikis, Athens, Greece.

出版信息

Bioessays. 2004 Feb;26(2):189-95. doi: 10.1002/bies.10387.

DOI:10.1002/bies.10387
PMID:14745837
Abstract

A model is proposed that deals with the observed collinearities (spatial, temporal and quantitative) of Hox gene expression during pattern formation along the primary and secondary axes of vertebrates. In particular, in the proximodistal axis of the developing limb, it is assumed that a morphogen gradient is laid down with its source at the distal tip of the bud. The extracellular signals in every cell of the morphogenetic field are transduced and uniformly amplified so that molecules are produced in the nucleus with appropriate physicochemical properties. These molecules can exert a concentration-dependent force on the Hox cluster. It is assumed that, before activation, the Hox cluster is packaged as an elongated rigid body inside the chromatin and is covered by a coat that prevents the transcription factors reaching the genes of the cluster. The transcription factors are confined to the interchromatin domain and their density decreases with their distance from the chromatin surface. A gradual increase in the extracellular morphogen concentration causes a corresponding increase in the number of the nuclear molecules and the resulting bigger force pushes the Hox cluster toward the interchromatin domain. The step-by-step translocations of the Hox cluster initiate the consecutive exposure of genes to their transcription factors. The model explains how gene activation is triggered and it describes spatial, temporal and quantitative collinearities at the initial stages of gene expression. Some recent experiments of Hox deletions and duplications are accounted for by the model.

摘要

本文提出了一个模型,用于处理脊椎动物沿主轴和次轴模式形成过程中观察到的Hox基因表达的共线性(空间、时间和定量)。特别是,在发育肢体的近远轴上,假定形态发生素梯度从芽的远端开始形成。形态发生场中每个细胞的细胞外信号被转导并均匀放大,从而在细胞核中产生具有适当物理化学性质的分子。这些分子可以对Hox基因簇施加浓度依赖性力。假定在激活之前,Hox基因簇作为一个细长的刚体包装在染色质内部,并被一层阻止转录因子到达基因簇基因的外壳覆盖。转录因子被限制在染色质间结构域,其密度随着与染色质表面距离的增加而降低。细胞外形态发生素浓度的逐渐增加导致核分子数量相应增加,由此产生的更大的力将Hox基因簇推向染色质间结构域。Hox基因簇的逐步易位启动了基因对其转录因子的连续暴露。该模型解释了基因激活是如何触发,并描述了基因表达初始阶段的空间、时间和定量共线性。最近一些Hox基因缺失和重复的实验也可以用该模型来解释。

相似文献

1
A cluster translocation model may explain the collinearity of Hox gene expressions.一种成簇易位模型或许可以解释Hox基因表达的共线性。
Bioessays. 2004 Feb;26(2):189-95. doi: 10.1002/bies.10387.
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Pulling forces acting on Hox gene clusters cause expression collinearity.作用于Hox基因簇的拉力导致表达共线性。
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A physical force may expose Hox genes to express in a morphogenetic density gradient.物理力可能会使同源基因在形态发生密度梯度中得以表达。
Bull Math Biol. 2001 Jan;63(1):185-200. doi: 10.1006/bulm.2000.0211.
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The establishment of murine Hox-1 expression domains during patterning of the limb.肢体模式形成过程中小鼠Hox-1表达域的建立。
Dev Biol. 1993 Jun;157(2):410-22. doi: 10.1006/dbio.1993.1145.
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Physical forces may cause Hox gene collinearity in the primary and secondary axes of the developing vertebrates.物理力量可能导致脊椎动物发育过程中初级和次级轴的 Hox 基因共线性。
Dev Growth Differ. 2011 Jan;53(1):1-8. doi: 10.1111/j.1440-169X.2010.01218.x.
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Cooperating morphogens control hoxd gene expression in the developing vertebrate limb.协同形态发生素控制发育中脊椎动物肢体中的hoxd基因表达。
J Theor Biol. 1998 May 7;192(1):43-53.
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Epigenetic temporal control of mouse Hox genes in vivo.小鼠体内Hox基因的表观遗传时间控制
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Pbx1/Pbx2 requirement for distal limb patterning is mediated by the hierarchical control of Hox gene spatial distribution and Shh expression.远端肢体模式形成对Pbx1/Pbx2的需求是由Hox基因空间分布和Shh表达的层级控制介导的。
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The evolution and maintenance of Hox gene clusters in vertebrates and the teleost-specific genome duplication.脊椎动物中Hox基因簇的进化与维持以及硬骨鱼特有的基因组复制
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引用本文的文献

1
Evolutionary constraints favor a biophysical model explaining hox gene collinearity.进化约束有利于解释同源盒基因共线性的生物物理模型。
Curr Genomics. 2013 Jun;14(4):279-88. doi: 10.2174/13892029113149990003.
2
Comparison of models for the collinearity of hox genes in the developmental axes of vertebrates.比较脊椎动物发育轴中同源盒基因共线性的模型。
Curr Genomics. 2012 May;13(3):245-51. doi: 10.2174/138920212800543093.
3
The mouse hairy ears mutation exhibits an extended growth (anagen) phase in hair follicles and altered Hoxc gene expression in the ears.
小鼠的多毛耳突变表现为毛囊生长期延长,且耳部Hoxc基因表达改变。
Vet Dermatol. 2008 Dec;19(6):358-67. doi: 10.1111/j.1365-3164.2008.00709.x. Epub 2008 Nov 14.