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解读鸡的内脏:进化的分子时间尺度与精确性的错觉

Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision.

作者信息

Graur Dan, Martin William

机构信息

Department of Biology and Biochemistry, University of Houston, Houston, TX 77204-5001, USA.

出版信息

Trends Genet. 2004 Feb;20(2):80-6. doi: 10.1016/j.tig.2003.12.003.

Abstract

For almost a decade now, a team of molecular evolutionists has produced a plethora of seemingly precise molecular clock estimates for divergence events ranging from the speciation of cats and dogs to lineage separations that might have occurred approximately 4 billion years ago. Because the appearance of accuracy has an irresistible allure, non-specialists frequently treat these estimates as factual. In this article, we show that all of these divergence-time estimates were generated through improper methodology on the basis of a single calibration point that has been unjustly denuded of error. The illusion of precision was achieved mainly through the conversion of statistical estimates (which by definition possess standard errors, ranges and confidence intervals) into errorless numbers. By employing such techniques successively, the time estimates of even the most ancient divergence events were made to look deceptively precise. For example, on the basis of just 15 genes, the arthropod-nematode divergence event was 'calculated' to have occurred 1167+/-83 million years ago (i.e. within a 95% confidence interval of approximately 350 million years). Were calibration and derivation uncertainties taken into proper consideration, the 95% confidence interval would have turned out to be at least 40 times larger ( approximately 14.2 billion years).

摘要

近十年来,一组分子进化学家针对从猫和狗的物种形成到大约40亿年前可能发生的谱系分离等各种分歧事件,给出了大量看似精确的分子钟估计值。由于精确性的表象具有不可抗拒的吸引力,非专业人士常常将这些估计值当作事实。在本文中,我们表明所有这些分歧时间估计值都是基于单一校准点,通过不当方法得出的,而这个校准点被不公正地消除了误差。精确性的假象主要是通过将统计估计值(根据定义,这些估计值具有标准误差、范围和置信区间)转换为无误差的数字来实现的。通过连续运用此类技术,即使是最古老分歧事件的时间估计值也被弄得看似精确得令人上当。例如,仅依据15个基因,节肢动物 - 线虫分歧事件被“计算”为发生在1.167亿±8300万年前(即大约在3.5亿年的95%置信区间内)。如果校准和推导的不确定性得到恰当考虑,95%置信区间结果会至少大40倍(约142亿年)。

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