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哮喘遗传学2003

Asthma genetics 2003.

作者信息

Weiss Scott T, Raby Benjamin A

机构信息

Channing Laboratory, Brigham and Women's Hospital, 181 Longwood Avenue, Boston, MA 02115, USA.

出版信息

Hum Mol Genet. 2004 Apr 1;13 Spec No 1:R83-9. doi: 10.1093/hmg/ddh080. Epub 2004 Feb 5.

DOI:10.1093/hmg/ddh080
PMID:14764626
Abstract

The use of positional cloning for the identification of complex trait susceptibility genes has gained momentum with the completion of the human genome project. The approach involves the collection of well-phenotyped cohorts (either family-based or case-control designs), the generation of high-density single-nucleotide polymorphism linkage disequilibrium maps, and the application of powerful statistical methods to localize narrow regions of genetic association with disease. In 2003, two novel genes relating to asthma were identified using this approach, PHF11 and DPP10, neither of which had previously been implicated in the pathobiology of either asthma or allergy. In addition, further support for ADAM33 (the first asthma susceptibility gene identified by positional cloning) as an asthma gene was presented, although with mixed results. These discoveries open new avenues for research in asthma and allergy, and highlight the power (and limitations) of positional cloning for the identification of asthma genes, and complex trait genes in general.

摘要

随着人类基因组计划的完成,利用定位克隆技术鉴定复杂性状易感基因的研究得到了进一步发展。该方法包括收集表型明确的队列(基于家系或病例对照设计),构建高密度单核苷酸多态性连锁不平衡图谱,并应用强大的统计方法定位与疾病相关的狭窄基因区域。2003年,通过该方法鉴定出两个与哮喘相关的新基因,即PHF11和DPP10,此前这两个基因均未被认为与哮喘或过敏的病理生物学有关。此外,尽管结果不一,但有更多证据支持ADAM33(首个通过定位克隆鉴定出的哮喘易感基因)是哮喘相关基因。这些发现为哮喘和过敏研究开辟了新途径,并凸显了定位克隆技术在鉴定哮喘基因及一般复杂性状基因方面的作用(及其局限性)。

相似文献

1
Asthma genetics 2003.哮喘遗传学2003
Hum Mol Genet. 2004 Apr 1;13 Spec No 1:R83-9. doi: 10.1093/hmg/ddh080. Epub 2004 Feb 5.
2
Positionally cloned susceptibility genes in allergy and asthma.通过定位克隆技术鉴定出的过敏和哮喘易感性基因
Curr Opin Immunol. 2004 Dec;16(6):689-94. doi: 10.1016/j.coi.2004.09.011.
3
ADAM33: a newly identified gene in the pathogenesis of asthma.ADAM33:哮喘发病机制中一个新发现的基因。
Immunol Allergy Clin North Am. 2005 Nov;25(4):655-68. doi: 10.1016/j.iac.2005.07.003.
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Natriuretic peptides and asthma: is there a connection?利钠肽与哮喘:存在关联吗?
Clin Exp Allergy. 2008 Jul;38(7):1068-70. doi: 10.1111/j.1365-2222.2008.03013.x. Epub 2008 May 21.
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Comprehensive testing of positionally cloned asthma genes in two populations.在两个人群中对定位克隆的哮喘基因进行全面检测。
Am J Respir Crit Care Med. 2007 Nov 1;176(9):849-57. doi: 10.1164/rccm.200704-592OC. Epub 2007 Aug 16.
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The discovery and role of ADAM33, a new candidate gene for asthma.哮喘新候选基因ADAM33的发现及其作用
Expert Rev Mol Med. 2004 Aug 3;6(17):1-12. doi: 10.1017/S1462399404007963.
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ADAM33 polymorphisms and phenotype associations in childhood asthma.儿童哮喘中ADAM33基因多态性与表型的关联
J Allergy Clin Immunol. 2004 Jun;113(6):1071-8. doi: 10.1016/j.jaci.2004.03.035.
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Polymorphisms of PHF11 and DPP10 are associated with asthma and related traits in a Chinese population.PHF11 和 DPP10 多态性与中国人群哮喘及相关表型相关。
Respiration. 2010;79(1):17-24. doi: 10.1159/000235545. Epub 2009 Aug 11.
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Mapping and identifying genes for asthma and psoriasis.绘制并识别哮喘和银屑病的相关基因。
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ADAM33 polymorphisms are associated with asthma susceptibility in a Japanese population.ADAM33基因多态性与日本人群的哮喘易感性相关。
Clin Exp Allergy. 2006 May;36(5):602-8. doi: 10.1111/j.1365-2222.2006.02471.x.

引用本文的文献

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Understanding Asthma and Allergies by the Lens of Biodiversity and Epigenetic Changes.从生物多样性和表观遗传变化的角度理解哮喘和过敏
Front Immunol. 2021 Mar 1;12:623737. doi: 10.3389/fimmu.2021.623737. eCollection 2021.
2
Unravelling the immunological roles of dipeptidyl peptidase 4 (DPP4) activity and/or structure homologue (DASH) proteins.揭示二肽基肽酶4(DPP4)活性和/或结构同源物(DASH)蛋白的免疫作用。
Clin Exp Immunol. 2016 Jun;184(3):265-83. doi: 10.1111/cei.12757. Epub 2016 Mar 2.
3
An understanding of the genetic basis of asthma.
了解哮喘的遗传基础。
Indian J Med Res. 2011 Aug;134(2):149-61.
4
Allele-specific transcription of the asthma-associated PHD finger protein 11 gene (PHF11) modulated by octamer-binding transcription factor 1 (Oct-1).哮喘相关的 PHD 手指蛋白 11 基因(PHF11)的等位基因特异性转录受八聚体结合转录因子 1(Oct-1)调控。
J Allergy Clin Immunol. 2011 Apr;127(4):1054-62.e1-2. doi: 10.1016/j.jaci.2010.12.015. Epub 2011 Feb 12.
5
Gene polymorphisms of IL-6(-174) G/C and IL-1Ra VNTR in asthmatic children.哮喘儿童中白细胞介素-6(-174)G/C基因多态性和白细胞介素-1受体拮抗剂可变数目串联重复序列
Indian J Pediatr. 2008 Oct;75(10):1019-23. doi: 10.1007/s12098-008-0161-z. Epub 2008 Sep 22.
6
Screening and replication using the same data set: testing strategies for family-based studies in which all probands are affected.使用相同数据集进行筛查和复制:针对所有先证者均患病的家系研究的检验策略。
PLoS Genet. 2008 Sep 19;4(9):e1000197. doi: 10.1371/journal.pgen.1000197.
7
Asthma from a pharmacogenomic point of view.从药物基因组学角度看哮喘。
Br J Pharmacol. 2008 Apr;153(8):1602-14. doi: 10.1038/bjp.2008.55. Epub 2008 Mar 3.
8
Gene-environment interactions in asthma.哮喘中的基因-环境相互作用
Occup Environ Med. 2006 Nov;63(11):776-86, 761. doi: 10.1136/oem.2004.019216.
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Policy implications of genetic information on regulation under the Clean Air Act: the case of particulate matter and asthmatics.《清洁空气法》规定下遗传信息对监管的政策影响:以颗粒物与哮喘患者为例
Environ Health Perspect. 2006 Mar;114(3):313-9. doi: 10.1289/ehp.8299.
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Intranasal exposure to bacterial superantigens induces airway inflammation in HLA class II transgenic mice.经鼻暴露于细菌超抗原可在 HLA II 类转基因小鼠中诱发气道炎症。
Infect Immun. 2006 Feb;74(2):1284-96. doi: 10.1128/IAI.74.2.1284-1296.2006.